Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0175 ATGGCAGCAATTTCCTTACGTGGCAGCCTCTGTTTCGACGTTATAGCATACATACAAAAAAGAGGTCGCACAGGATCAAAACTCCCCAATTGCACCCGCTTAGGCTACAGCTGCGGAAGAACCCGCACAGAAGCAGAGCATCTCTCTTCTTTCTCTCTATCTATAAATAATCAAAGTGTCGGCTTTAGATTTCTCTATTTCTTCACAATCTTCTTCATTCCCTCTTTTCGGTTGATGGCATCTCAAGCTAGCCTTCTTCTTCAAAAGCAGTTAAAAGATCTTTGCAAACACCCTGTCGACGGATTCTCCGCCGGTTTAGTAGATGAAAACAATATATTCGAATGGAGTGTCACAATAATTGGGCCTCCTGATACTCTTTATGAGGGGGGATTCTTCAATGCTATTATGAGTTTTCCATCAAATTACCCGAACAGCCCACCATCAGTGAAATTCACTTCAGAGATATGGCATCCAAATGTATATCCTGATGGACGGGTTTGCATATCAATTCTTCATCCTCCTGGTGAGGATCCAAATGGATATGAACTTGCTAGTGAGCGCTGGACACCTGTTCATACGGTAGAGAGTATAGTTTTGAGTATCATTTCTATGCTTTCTAGTCCTAATGATGAATCTCCAGCAAATGTCGAAGCTGCTAAGGAGTGGAGAGACAGGAGAGACGACTTCAAGAAGAAGATTGGCCGTTGTGTGAGGAAATCACAAGAAATGTTGTGA 735 0.4259 MAAISLRGSLCFDVIAYIQKRGRTGSKLPNCTRLGYSCGRTRTEAEHLSSFSLSINNQSVGFRFLYFFTIFFIPSFRLMASQASLLLQKQLKDLCKHPVDGFSAGLVDENNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKIGRCVRKSQEML 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0175 244 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 82 242 IPR000608 -
Mibi07g0175 244 Pfam Ubiquitin-conjugating enzyme 87 235 IPR000608 -
Mibi07g0175 244 FunFam ubiquitin-conjugating enzyme E2 7 80 244 - -
Mibi07g0175 244 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 156 171 IPR023313 -
Mibi07g0175 244 SMART ubc_7 85 242 - -
Mibi07g0175 244 SUPERFAMILY UBC-like 81 240 IPR016135 -
Mibi07g0175 244 Gene3D Ubiquitin Conjugating Enzyme 79 244 IPR016135 -
Mibi07g0175 244 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 81 241 - -
Mibi07g0175 244 CDD UBCc 95 237 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0175 Mibi-ChrMibi07 2364826 2368742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0175 89 209 Miscellaneous Gene Families AT3G17000 32.308 1.70e-12 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0101 01 1076740 1080421 Mibi07g0175 07 2364826 2368742 CCT