Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0080 ATGTTGATGAAGCTTCAGACTAGCTCACATTGTGGTTATAATAGCCACCTGGTGTTTCAGAAGCCATGGATAAATGTGGAGGGTGGAAAAAGTCCATTACTTTTAGTGGGACACTTAATCCGAAACCAAAAGAAACAAAAGAGGGTTGGGATTAGGTGCAGCGGCGGTGGCACTGACCTGAAGGCGGTGACGGCCGCCGCGGGAAAAGAAAAGACGACCAGGGTGAAAGTCACTCTAACTGTTCTAAGAACTGTTGAAGGCTATTTCTCAGAAGTAGGTATCCAGCGAGGGCTCGATGATATCAAGGAGGTGCTTGGTAAATCTCTTCAAGTGGAGCTCCTTAGCGCTGATCTTGAACCCAAGACGGGAGTGGAGAAGGAGGGCATAAAAGGATTCGTGCATAGAAGCGAGGAAGAGAATGGAGAGGTGAAGTATGAAGCAGAATTAGAAGTGGGGAATGAGTTTGGAGAGATAGGGGCATTGGTGGTGGAGAATGAACACCACAAGGAGGTATTCTTGAAGGACGTGGTCCTTCATGGCTTAGAGGGCGGTCCCCTCCGTTTCTCCTGCAACTCTTGGGTTCATTCCAAGTACGACCTTCCCGTCAACAGAGTCTTCTTCCCCAACAAGTCGTACTTGCCGAGGGAGACGCCGGAGGGGATAAAGAGGATAAGGGAGGAGGAGCTGAAGGAGGTGAGGGGGAACGGCGTGGGAGAGAGGAAGAGCTACGAGAGGGTGTACGATTATGACGTGTACAACGACCTAGGAGATCCCGACAGCAGCGACGACCTTAAGAGGCCTGTTCTTGGCGGCAAACATTTCCCTTATCCTAGGAGGTGTCGAACCGGTCGTCCCCGCTCTCACAAAGATCCATTGTCAGAGCAAAGGAGTAGCAGCGTGTACGTGCCGAGAGACGAAGCATTCTCAGAAGTGAAGCAGCTGACGTTTTCAACGAAGGCGGTGTACTCTGTGTTGCATGCGCTGGTGCCAGCGCTGCAGACCAGCATGTTGGACAGTACACTTGGCTTCCCTCTCTTCTCATCCATTGATTCTCTCTTCAATGAAGGTGTCAACTTGCCTCCTCTCAAAACCAAAGGATTCCTCAGCACCGTCTTGCCCCGCCTCGTCAAGTTCATCAATGACGCCGAACAAGACATCCTCCGTTTTGAGACCCCCTCTACTATGGACCGAGACAGGTTCTTTTGGTTTAGGGACGAGGAATTCGCTAGGCAAACTCTGGCAGGTCTCAACCCTTGCAGCATCCAATTGGTTACGGAGTGGCCATTGAAAAGTGCACTAGATCCCGAGATCTATGGCCCACAAGAATCAGCAATAACTACGGAAGTCATCGAGAGAGAAATCAAAGGTTTTGCCACAGTGGAAGAGGCCATAAAACAGAAGAAGTTGTTCATCCTAGACTACCACGACCTGTTGCTACCATATGTGGAGAAGGTAAGAGGGCTTGAAGGGACAACCCTGTATGGATCAAGGACGTTGTTCTTCCTCACCCCAGACAACACATTGAGGCCTCTAGCCATCGAGCTAACTAGGCCTCCCATAGGGGACAAGCCCCATTGGAGACAAGTTTTCACCCCCACCTGGCACTCCACCGGTGTTTGGCTCTGGAGGCTCGCCAAAGCCCACGTCCTTGCCCATGACTCCGGCTTCCACCAACTCGTCAGCCACTGGCTGCGCACCCACTGTTGTACGGAACCATACATCATTGCCACAAACAGACAGCTGAGTGCAATGCACCCAATCTACAGGCTACTACACCCACACTTCAGATACACGATGGAGATAAACGCCCTAGCACGTGAGGCACTCATAAACGCAGGAGGAATAATAGAGAGCAGCTTCACACCAGCAAAATACTCCATCGAAATCAGCTCCGTGGCCTACGACAAGCTGTGGCAGTTCGACCTACAAGCCCTCCCCGCCGACCTCATCCACAGGGGACTCGCCGTGGAGGACCCCACCTCCCCCCACGGCCTCAAACTCACCATCCCTGACTACCCTTACGCCTCCGACGGCCTCCTCCTCTGGGACGCCATCAAACAATGGGTCACCGACTACGTCAACCGCTACTACCCCGACCCAAGTCTAGTCGGGTCGGACCCCGAGCTCCAGGCTTGGTGGGAAGAGATCCGAACCAAAGGGCATGCAGACAAAAAAGACGAGCCATGGTGGCCGGTTCTTGAAACACCTAAAGATTTAGTGGACATCGTGACCACTATTGTTTGGATAACGTCGGGTCACCACGCGGCGGTTAATTTCGGGCAGTACACGTATGCCGGGTATTTTCCGAACCGGCCGACGATAGCGAGGACTAATGTGCCGACGGAGGAGCCGTCGGAGACGGAGTGGGAGGTTTTCTTGAACAAGCCGGAGCTTGCTTTGTTGAGGTGTTTTCCGTCGCAGGTACAGGCGACGACGGTGATGTCGGTGCTGGATATTCTGTCGAGTCACTCGCCGGACGAGGAGTATCTTGGGGCCAATATGGAGCCGTCGTGGGAGGAGGATCAGGTGGTGAAGGCGGCGTTTGAACGGTTCCAAGGGCGGCTGAAGGAGTTGGAAGGTTTGATTGATTTGAGGAATGCTGACTCTAATCTTAGGAACAGAAATGGTGCTGGGGTTGTGCCTTATGAGCTTTTGAAGCCCTTTTCCGAGGAACCTGGAGTCACCGGAAAAGGTGTTCCTTACAGTATCTCCATTTGA 2718 0.5261 MLMKLQTSSHCGYNSHLVFQKPWINVEGGKSPLLLVGHLIRNQKKQKRVGIRCSGGGTDLKAVTAAAGKEKTTRVKVTLTVLRTVEGYFSEVGIQRGLDDIKEVLGKSLQVELLSADLEPKTGVEKEGIKGFVHRSEEENGEVKYEAELEVGNEFGEIGALVVENEHHKEVFLKDVVLHGLEGGPLRFSCNSWVHSKYDLPVNRVFFPNKSYLPRETPEGIKRIREEELKEVRGNGVGERKSYERVYDYDVYNDLGDPDSSDDLKRPVLGGKHFPYPRRCRTGRPRSHKDPLSEQRSSSVYVPRDEAFSEVKQLTFSTKAVYSVLHALVPALQTSMLDSTLGFPLFSSIDSLFNEGVNLPPLKTKGFLSTVLPRLVKFINDAEQDILRFETPSTMDRDRFFWFRDEEFARQTLAGLNPCSIQLVTEWPLKSALDPEIYGPQESAITTEVIEREIKGFATVEEAIKQKKLFILDYHDLLLPYVEKVRGLEGTTLYGSRTLFFLTPDNTLRPLAIELTRPPIGDKPHWRQVFTPTWHSTGVWLWRLAKAHVLAHDSGFHQLVSHWLRTHCCTEPYIIATNRQLSAMHPIYRLLHPHFRYTMEINALAREALINAGGIIESSFTPAKYSIEISSVAYDKLWQFDLQALPADLIHRGLAVEDPTSPHGLKLTIPDYPYASDGLLLWDAIKQWVTDYVNRYYPDPSLVGSDPELQAWWEEIRTKGHADKKDEPWWPVLETPKDLVDIVTTIVWITSGHHAAVNFGQYTYAGYFPNRPTIARTNVPTEEPSETEWEVFLNKPELALLRCFPSQVQATTVMSVLDILSSHSPDEEYLGANMEPSWEEDQVVKAAFERFQGRLKELEGLIDLRNADSNLRNRNGAGVVPYELLKPFSEEPGVTGKGVPYSISI 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0080 905 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 211 905 IPR013819 GO:0016702|GO:0046872
Mibi07g0080 905 CDD PLAT_LH2 73 209 IPR042057 -
Mibi07g0080 905 PANTHER LIPOXYGENASE 74 905 IPR000907 GO:0016702|GO:0034440|GO:0046872
Mibi07g0080 905 ProSitePatterns Lipoxygenases iron-binding region signature 1. 557 571 IPR020833 GO:0016702|GO:0046872
Mibi07g0080 905 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 74 212 IPR036392 GO:0005515
Mibi07g0080 905 SUPERFAMILY Lipoxigenase 213 905 IPR036226 -
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 178 196 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 243 259 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 275 294 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 204 225 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 494 518 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 387 403 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 817 831 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 340 361 IPR001246 GO:0016491
Mibi07g0080 905 PRINTS Plant lipoxygenase signature 426 445 IPR001246 GO:0016491
Mibi07g0080 905 Pfam Lipoxygenase 221 887 IPR013819 GO:0016702|GO:0046872
Mibi07g0080 905 ProSiteProfiles PLAT domain profile. 88 208 IPR001024 GO:0005515
Mibi07g0080 905 SMART LH2_4 73 209 IPR001024 GO:0005515
Mibi07g0080 905 FunFam Lipoxygenase 419 553 - -
Mibi07g0080 905 Pfam PLAT/LH2 domain 142 207 IPR001024 GO:0005515
Mibi07g0080 905 Gene3D - 231 329 - -
Mibi07g0080 905 FunFam Lipoxygenase 536 904 - -
Mibi07g0080 905 PRINTS Lipoxygenase signature 539 556 IPR013819 GO:0016702|GO:0046872
Mibi07g0080 905 PRINTS Lipoxygenase signature 557 574 IPR013819 GO:0016702|GO:0046872
Mibi07g0080 905 PRINTS Lipoxygenase signature 577 597 IPR013819 GO:0016702|GO:0046872
Mibi07g0080 905 Gene3D - 554 903 - -
Mibi07g0080 905 Gene3D - 419 553 - -
Mibi07g0080 905 MobiDBLite consensus disorder prediction 258 299 - -
Mibi07g0080 905 Gene3D PLAT/LH2 domain 74 230 - -
Mibi07g0080 905 Gene3D - 331 418 IPR027433 -
Mibi07g0080 905 ProSitePatterns Lipoxygenases iron-binding region signature 2. 584 594 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0080 Mibi-ChrMibi07 1354730 1361488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0080 154 905 Acyl Lipid Metabolism Gene Families AT3G45140 60.979 0.0 966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0080 07 1354730 1361488 Mibi07g0080 07 1354730 1361488 ECH