Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0018 ATGGTGAAGGCGGCGATGATGATGATGAGCATTGTATTATTATTAGTAGTAGTAGCGTCGCCGTCGGAGGCAGCAGGAGGAGGGGTGGCGGACATAGTGACGCCGGAGTTCTTCAACTCTATCATCGATGAGGCGGATGGGAGCTGTGCAGGCAAGAACTTCTACACACGGGACGCCTTCCTCACCGCTCTCAACTCCTTCTCTCAATTCGGAAGCCTCCCCTCCCCCGACGACTCCAAACGCGAGATCGCCGCCGCTTTCGCCCATTTCACCCACGAAACTGGACATTTCTGCTACATAGAAGAGATAAACGGTGCGTCTGGGGATTACTGCGACGAGAGCAACACACAGTACCCATGCGCCCCCAACAAAGAGTACTACGGTCGAGGGCCCATCCAACTGTCCTGGAACTTCAACTATGGCCCCGCCGGAGAGGCCATCGGCTTCGACGGCCTCAACGCCCCCGAGACGGTGGCCAACGATGCCGTGGTGGCCTTCAAGACGGCTCTCTGGTACTGGATGCAGCACGTCCGTCCCGTCCTCAACCAAGGCTTCGGCGCCACCATCCGAGCCATCAACGGCCGCCTCGAATGTGACGGCGCCAATTCCGCCACTGTTCAGGCTCGTGTTTCTTACTACACCCGTTACTGTTCCCAGCTGGGTGTTGCTCCCGGTGATAATCTCACTTGCTAG 693 0.5772 MVKAAMMMMSIVLLLVVVASPSEAAGGGVADIVTPEFFNSIIDEADGSCAGKNFYTRDAFLTALNSFSQFGSLPSPDDSKREIAAAFAHFTHETGHFCYIEEINGASGDYCDESNTQYPCAPNKEYYGRGPIQLSWNFNYGPAGEAIGFDGLNAPETVANDAVVAFKTALWYWMQHVRPVLNQGFGATIRAINGRLECDGANSATVQARVSYYTRYCSQLGVAPGDNLTC 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0018 230 PIRSF Endochitinase 3 230 IPR016283 GO:0004568|GO:0005975
Mibi07g0018 230 Pfam Chitinase class I 183 230 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mibi07g0018 230 Pfam Chitinase class I 32 176 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mibi07g0018 230 Gene3D Endochitinase, domain 2 103 156 - -
Mibi07g0018 230 ProSitePatterns Chitinases family 19 signature 2. 164 174 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mibi07g0018 230 SUPERFAMILY Lysozyme-like 29 230 IPR023346 -
Mibi07g0018 230 CDD chitinase_GH19 33 230 - -
Mibi07g0018 230 FunFam Endochitinase (Chitinase) 101 160 - -
Mibi07g0018 230 FunFam Endochitinase PR4 17 109 - -
Mibi07g0018 230 PANTHER CHITINASE-RELATED 25 230 - -
Mibi07g0018 230 ProSitePatterns Chitinases family 19 signature 1. 49 71 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mibi07g0018 230 Gene3D - 17 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0018 Mibi-ChrMibi07 743294 744167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0018 20 230 Glycoside Hydrolase AT3G54420 75.355 6.52e-118 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0018 07 743294 744167 Mibi07g0018 07 743294 744167 ECH