Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2607 ATGGCCTCCCTCTCATGCATCCTGAGTATCAGTTTGATGCTTGTGATGGCTGTGGGCGGAGAAGGAAGCGATCCATTTGCATGTGACCCAAAAGTGGTCAACACGAGTACGCTGCCGTTCTGCAAAACATCGCTTTCGACAGCAGAGAGAGTGAAGGACCTGATCGGAAGGCTGACTTTGGCAGAGAAAGTGAGGCTGCTGGTGAACAATGCGGTTGGGATCCCACGCCTCGGGATCAAAGGGTACGAGTGGTGGTCGGAAGCACTCCACGGCGTTTCCAATGTGGGCCCCGGCACCAAGTTCGCCGCCCCATTCCCCGCCGCCACCAGCTTCCCCCAAGTCATCACCACCGCCGCCTCTTTCAACGCATCCCTCTGGGAGGCCATCGGCCAGGTAGTTTCAGACGAAGCAAGAGCAATGTATAACGGAGGAACGGCGGGGTTAACATACTGGAGCCCAAACGTGAACATATTGAGGGACCCCAGGTGGGGACGCGGACAGGAAACTCCCGGTGAAGATCCCCACCTCGCCGGCAAATATGCGGCCCATTACGTGAGGGGCTTACAGGGAACCGACCCCAACCGGTTAAAGGTCGCCGCATGCTGCAAGCATTTCACGGCGTACGATCTCGATAATTGGAACGGCATGGATCGCTTCCACTTCAATGCTCAGGTAAGCAAGCAAGATATAGAGGACACGTTCGACGTGCCATTCAGGATGTGTGTGAAGGAAGGGAATGTGGCGAGTGTGATGTGTTCATATAACCAGGTGAATGGTAAGCCCACGTGTGCTGACCCCAACCTTCTGAAGGGGACGGTTCGTGGGCAGTGGCATCTAAACGGCTACATAGTGTCAGACTGTGACTCAGTGGGAGTCTTCTTCTCCAACCAGCATTATACTTCCACCCCTGAGGAGGCAGCCGCCGATGCCATCAAAGCTGGTTTGGATTTGGACTGTGGTCCTTTCCTCGCTCAACATACTCAGGACGCCGTCAACAAGGGCTTGCTCTCCGATGCCCATGTCAATGGTGCCCTTGTGAATACACTAACGGTCCAAATGAGATTGGGCATGTTTGATGGACAACCATCGGCTCAGCCGTTTGGTCATTTGGGTCCAAAAGATGTGTGCACACCTGCTCACCATGATCTTGCACTCCAGGCTGCCACCCAAGGAATCGTCCTCCTTAAGAACCATGGCCCCACTCTGCCCCTCTCTCCACGTCGTCACCGTACCGTGGCTGTTATTGGTCCCAATTCTAATGTCACCGTTACCATGATCGGTAACTATGCAGGTATTGCTTGCGGATACACCAGTCCGTTGCAGGGAGTAGGTAAATACGCGACGACTATTCACCAGCTCGGATGTTTGAACGTGGCTTGTTCTGATGACAAACAGTTCGGTGGGGCTTTAGACGCGGCCCGTCGGGCCGACGCGACCGTTCTTGTGATGGGCTTAGATCAGTCCATTGAGGCTGAAACCGTAGACAGGGCCGGCCTGCTACTTCCTGGCCATCAGCAAGACCTCGTATCAAAGGTGGCGGCAGCCTCCAAGGGCCCCACTATTTTGGTGTTGATGTCCGGCGGTCCTGTTGACGTCACTTTCGCCAAGAACGACCCACGTGTCGCCGCCATCTTGTGGGCTGGCTATCCAGGCCAGGCCGGCGGCGCCGCCATCGCCGATATCTTGTTCGGAACCGCAAACCCAGGTGGTAAGCTGCCTATGACATGGTACCCACAAGAGTACCTCACCAACTTACCCATGACAAACATGGCAATGAGAGCAAGCAGGTCTAAAGGGTACCCAGGAAGAACTTATAGGTTTTACAAGGGACCAGTGGTGTACCCGTTTGGGTACGGATTAAGCTACACCCAATTTGTTCACACATTGGCCGGAGCACCGAAGGTGGTGACGGTGCCGGTGGATGGGCACCGCCGTGGGAATAACAGCAACATGTCAAACAAGGCAATTAGAGTGACACATGCGAGATGTGGGAAGCTTTCCGTCAGCTTGGACGTGGACGTTAAGAATGTTGGTTCTGTGGATGGCACTCACACGCTGTTGGTGTTCTCGGCGCCACCTGCTGGAGGACAGTGGGCCCCGCACAAGCAACTGGTGGCCTTCGAGAAGGTGCACGTCCCCGCCAAAGCTCAGCAACGGGTGAGAGTCAATATTCATGTGTGCAAATTGCTGAGTGTGGTGGACAGTTCTGGGATTAGGAGAATTCCCATGGGTGATCATCATCTTCACATTGCTGATGTCAAACACTCCATATCGCTTCGAGCACAAACTCTTGGGATTATAAAGACCTGA 2310 0.5446 MASLSCILSISLMLVMAVGGEGSDPFACDPKVVNTSTLPFCKTSLSTAERVKDLIGRLTLAEKVRLLVNNAVGIPRLGIKGYEWWSEALHGVSNVGPGTKFAAPFPAATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNILRDPRWGRGQETPGEDPHLAGKYAAHYVRGLQGTDPNRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEDTFDVPFRMCVKEGNVASVMCSYNQVNGKPTCADPNLLKGTVRGQWHLNGYIVSDCDSVGVFFSNQHYTSTPEEAAADAIKAGLDLDCGPFLAQHTQDAVNKGLLSDAHVNGALVNTLTVQMRLGMFDGQPSAQPFGHLGPKDVCTPAHHDLALQAATQGIVLLKNHGPTLPLSPRRHRTVAVIGPNSNVTVTMIGNYAGIACGYTSPLQGVGKYATTIHQLGCLNVACSDDKQFGGALDAARRADATVLVMGLDQSIEAETVDRAGLLLPGHQQDLVSKVAAASKGPTILVLMSGGPVDVTFAKNDPRVAAILWAGYPGQAGGAAIADILFGTANPGGKLPMTWYPQEYLTNLPMTNMAMRASRSKGYPGRTYRFYKGPVVYPFGYGLSYTQFVHTLAGAPKVVTVPVDGHRRGNNSNMSNKAIRVTHARCGKLSVSLDVDVKNVGSVDGTHTLLVFSAPPAGGQWAPHKQLVAFEKVHVPAKAQQRVRVNIHVCKLLSVVDSSGIRRIPMGDHHLHIADVKHSISLRAQTLGIIKT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2607 769 SMART Fn3_like_2 684 754 IPR026891 -
Mibi06g2607 769 FunFam probable beta-D-xylosidase 7 50 364 - -
Mibi06g2607 769 FunFam probable beta-D-xylosidase 2 377 623 - -
Mibi06g2607 769 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 622 IPR002772 GO:0004553|GO:0005975
Mibi06g2607 769 PANTHER SUGAR HYDROLASE-RELATED 16 757 IPR044993 GO:0009044|GO:0045493
Mibi06g2607 769 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 625 IPR036881 GO:0004553|GO:0005975
Mibi06g2607 769 Pfam Glycosyl hydrolase family 3 N terminal domain 107 347 IPR001764 GO:0004553|GO:0005975
Mibi06g2607 769 SUPERFAMILY (Trans)glycosidases 38 391 IPR017853 -
Mibi06g2607 769 FunFam Probable beta-D-xylosidase 2 647 766 - -
Mibi06g2607 769 Gene3D Immunoglobulins 646 767 IPR013783 -
Mibi06g2607 769 Pfam Fibronectin type III-like domain 685 751 IPR026891 -
Mibi06g2607 769 Gene3D - 377 623 IPR036881 GO:0004553|GO:0005975
Mibi06g2607 769 Gene3D - 50 366 IPR036962 GO:0004553|GO:0005975
Mibi06g2607 769 PRINTS Glycosyl hydrolase family 3 signature 272 290 IPR001764 GO:0004553|GO:0005975
Mibi06g2607 769 PRINTS Glycosyl hydrolase family 3 signature 111 130 IPR001764 GO:0004553|GO:0005975
Mibi06g2607 769 PRINTS Glycosyl hydrolase family 3 signature 198 214 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2607 Mibi-ChrMibi06 46158979 46162565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2607 1 769 Glycoside Hydrolase AT1G02640 73.732 0.0 1179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0384 02 3887183 3894090 Mibi06g2607 06 46158979 46162565 CCT
Mibi06g2607 06 46158979 46162565 Mibi06g2607 06 46158979 46162565 ECH