Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2606 ATGACAATGGCCGTCGCTACTACCTCCTCTCTCAATGCTTCTGATAGAAAGTACTGGTGGCTCACCAACCGAAAGATTGTTGAGAAATACATAAAAGACGCTAGGAGCCTCATTGCGAGCCAAGAACAGGGCGAGATCGCGTCGGCTCTGAATCTTGTAGACGCTGCGCTGGCCATATCTCCACGGCTGGAGCAGGCGCTGGAGCTAAGAGCGAGGTCTCTTCTTTATCTGAGGCGTTTTAAGGACGTGGCCGATATGCTTCGGGACTACATTCCCAGCCTCAAGATGGCTGTAGAGGATTCCGGCTCCTGTTCTTCGGACAGTTCGTCTCAGCAGCTCTCGAGGGAGGGAGTGAAGCTTCTCTCTTCTTCCGAGTCTTCGCCCGATCAGAGTTTCAAGTGCTTCTCTGTTTCCGACTTGAAGAAGAAAGTCATGGCAGGCCTTTGTAAAAGTGGCGACAAGGGAGGGCAATGGAGATACTTGGTGCTTGGTCAAGCATGTTGTCATCTTGGTCTGATGGAGGATGCGATGGTTCTTCTCCAAACCGGGAAACGACTCGCCACCGCCGCCTTCCGCCGTGAAAGCGTTTGCTGGTCCGACGACAGCTTCTCCCTAACAAGCATCCCCTTCTCCGGCGACGCCACTCCCACCACTCCACCTCGCACACCCCTCACAGAATTCGAAAACGTCACCCAACTCCTCAGCCACATCAAGCTCCTCCTCCGCCGTCGCACGGCCGCCCTCGCCGCCCTCGACGCCGGCCTCTTCTCCGAGGCCATCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGTGGCGCTCCCCAAGCCTTCCTTGCCGAATGTTACATGCACAGAGCCTCTGCTTACCGTTCCTCAGGAAGAATTGCAGAGTCCATTGCCGATTGTAATCGCACTTTGGCTTTGAACCCCACTTGCATTCAAGCTCTTGATACCAGAGCTGCCCTTCTTGAATCCATTCGATGCTTGCCTGATTGTTTACATGATCTTGAGCATTTGAAGCTTTTGTATAATACGATATTGCGTGATCGTAAGCTTCCTGGTCCTGTTTGGAAGCGTCATAATGTGAGGTACAGGGAGATTCCTGGGAAACTCTGTGCTCTCACGACGAAGATTCAGGAACTTAAGCAGAGGGTGGCTTCTGGGGAGACTGGTAATGTGGATTACTATGGTTTGATTGGATTGCGACGCGGTTGCTCTCGATCGGAGCTGGAGAGGGCTCATTTGTTGCTGTGTTTACGGCACAAGCCGGATAAAGCTATCAGCTTTATTGATCGTTGTGAGCTTGCGGATGAAAGGGATCTTGAATCGGTGAAGGAGAGGTCGAAAATGTCGGCGTTGTTATTGTACAGATTGATTCAGAAGGGTTACACGAATGTGATGGCTTCGATCATGGATGAAGAAGCAGCTGAAAAGCAGAGGAAGAAGGCTGCTGCTGCTTTGCAAGCTGCACAAGCAGCAATTCAGGTTCCGGAAAAAAGTGGGTGCAGAGGGGACTATGAGGAGAAGAAATCAGAGAAAAGTGTGTCTTCATCGACTGTGAACCCTTCTGTATTTCAGGGGGTGTTTTGCCGTGATCTTGCTGTCGTTGGGAGCTTGCTTTCGCAAGCAGGATTCAACCGTTCTATTCCATTGAAATATGAGGCATTGAGCTGCTGA 1677 0.5164 MTMAVATTSSLNASDRKYWWLTNRKIVEKYIKDARSLIASQEQGEIASALNLVDAALAISPRLEQALELRARSLLYLRRFKDVADMLRDYIPSLKMAVEDSGSCSSDSSSQQLSREGVKLLSSSESSPDQSFKCFSVSDLKKKVMAGLCKSGDKGGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFSLTSIPFSGDATPTTPPRTPLTEFENVTQLLSHIKLLLRRRTAALAALDAGLFSEAIRHFSKIVDGRRGAPQAFLAECYMHRASAYRSSGRIAESIADCNRTLALNPTCIQALDTRAALLESIRCLPDCLHDLEHLKLLYNTILRDRKLPGPVWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYGLIGLRRGCSRSELERAHLLLCLRHKPDKAISFIDRCELADERDLESVKERSKMSALLLYRLIQKGYTNVMASIMDEEAAEKQRKKAAAALQAAQAAIQVPEKSGCRGDYEEKKSEKSVSSSTVNPSVFQGVFCRDLAVVGSLLSQAGFNRSIPLKYEALSC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2606 558 Gene3D DnaJ domain 379 526 IPR036869 -
Mibi06g2606 558 PANTHER OS01G0273500 PROTEIN 8 558 - -
Mibi06g2606 558 SMART tpr_5 279 312 IPR019734 GO:0005515
Mibi06g2606 558 CDD DnaJ 394 426 IPR001623 -
Mibi06g2606 558 Gene3D Tetratricopeptide repeat domain 228 351 IPR011990 GO:0005515
Mibi06g2606 558 SUPERFAMILY TPR-like 246 340 IPR011990 GO:0005515
Mibi06g2606 558 Coils Coil 473 493 - -
Mibi06g2606 558 SUPERFAMILY Chaperone J-domain 390 428 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2606 Mibi-ChrMibi06 46147462 46149782 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0385 02 3917809 3920137 Mibi06g2606 06 46147462 46149782 CCT
Mibi06g2606 06 46147462 46149782 Mibi06g2606 06 46147462 46149782 ECH