Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2579 ATGAGTCGTCGTTGTTTGGACAGTCAAACAATGACTTTCTTCATCTTGCTCTTGCTCTTGCTCTTGCTCGTTTCCCTCTTTTCTGCTTCTCAAGCCTTCCCTCCTCAAGACCACCACCACCACCACCACCGTCGCTTTGCTTCTCACAATTACAGAGATGCCCTCTCCAAATCCATCCTCTTTTTTGAAGGACAGAGGTCCGGAAAACTCCCTCCTAACCAGAGGATGACTTGGAGGGGAGACTCTGCTCTCTCGGACGGCTCTGCAATGCATGTTGACTTGGTGGGAGGGTACTACGATGCAGGGGACAATGTCAAGTTTGGCTTTCCCATGGCATTCACAGCCACCATGCTTTCCTGGAGTGTTATTGAGTTTGGTGGGGTTATGAAAGGTGAATTGCAGAATGCCAGAGAAGCCATTCGCTGGGCTACCGATTACTTACTTAAGGCTACTGAATATCCGGACGTCATTTACGTTCAGGTAGGAGATGCTAGGAGCGATCACACTTGCTGGGAGAGACCAGAGGACATGGACACCCCAAGAAATGTGTACAAGATAGATAAGAACAACCCTGGTTCAGATGTTGCTGCCGAAACTGCAGCCGCTTTAGCTGCAGCTTCTCTGGTTTTCAAGAAAAGTGACCCCTCCTACTCCAAAACTCTAGTCACTAGGGCTACAAGGGTGTTTGAGTTTGCTGATAAATACAGGGGATCTTACAGTGATGGGCTGAAGCCCATTGTATGCCCTTTCTATTGCTCTTACTCTGGCTATCAGGATGAGCTGTTATGGGGTGCTGCTTGGCTGCTCAGGGCTACTGGGAAGACAATGTACCTAAACTATATCCAAGCTAATGGACCCACCCTTGGGGCTGCGGAGTCTGATAATATGTTTGGGTGGGATAACAAGCACGTCGGGGCAAGGATACTCCTTTCCAAGGCATTCGTCGTTCAAAAAGTACAATCGCTCCAAGACTACAAAATCCACGCAGACAACTTCATATGTTCCATAATTCCTGGGACCTCTTTCTCTTCTTCCCAATATACCCCAGGAGGGCTTCTGTTCAAGATGAGTGATAGCAACATGCAGTATGTGACGTCCACTTCCTTCCTGCTCATAACCTATGCCAAGTACTTGACCTCAGCTCACATGTCTGTCACTTGTGGTGGGGCCACTGTCACTCCAAAGGCTCTTCGCAGTATGGCCAAGAAACAGGTTGATTACTTGCTGGGTGATAACCCCTTGAAGATGTCGTACATGGTGGGGTATGGTCCAAATTACCCGCGAAGGATACACCACAGGGGATCATCTCTACCGTCCATTTCAGTTCACCCCGCCAAGATCCAATGCTCTGCAGGCTTCAACGCCTTGAGTTCACAGAGCCCCAATCCTAACGTACTAGTGGGGGCAGTGGTTGGTGGGCCAGACTTGCACGATAGGTTTCCGGATGAACGGTCAGATTATGCGCAATCAGAACCAGCCACTTACACAAACGCCCCCCTTGTGGGTGCCTTGGCTTATCTTGCTCACTCATTCGGCCAACTCTAA 1545 0.4939 MSRRCLDSQTMTFFILLLLLLLLVSLFSASQAFPPQDHHHHHHRRFASHNYRDALSKSILFFEGQRSGKLPPNQRMTWRGDSALSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTATMLSWSVIEFGGVMKGELQNAREAIRWATDYLLKATEYPDVIYVQVGDARSDHTCWERPEDMDTPRNVYKIDKNNPGSDVAAETAAALAAASLVFKKSDPSYSKTLVTRATRVFEFADKYRGSYSDGLKPIVCPFYCSYSGYQDELLWGAAWLLRATGKTMYLNYIQANGPTLGAAESDNMFGWDNKHVGARILLSKAFVVQKVQSLQDYKIHADNFICSIIPGTSFSSSQYTPGGLLFKMSDSNMQYVTSTSFLLITYAKYLTSAHMSVTCGGATVTPKALRSMAKKQVDYLLGDNPLKMSYMVGYGPNYPRRIHHRGSSLPSISVHPAKIQCSAGFNALSSQSPNPNVLVGAVVGGPDLHDRFPDERSDYAQSEPATYTNAPLVGALAYLAHSFGQL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2579 514 FunFam Endoglucanase 47 512 - -
Mibi06g2579 514 Gene3D - 47 510 IPR012341 GO:0005975
Mibi06g2579 514 SUPERFAMILY Six-hairpin glycosidases 48 512 IPR008928 GO:0005975
Mibi06g2579 514 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 480 498 IPR033126 -
Mibi06g2579 514 PANTHER ENDO-1,4-BETA-GLUCANASE 20 509 - -
Mibi06g2579 514 Pfam Glycosyl hydrolase family 9 51 504 IPR001701 GO:0004553|GO:0005975
Mibi06g2579 514 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 407 433 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2579 Mibi-ChrMibi06 45929034 45931329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2579 14 510 Glycoside Hydrolase AT1G02800 74.849 0.0 753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0414 02 4183515 4185710 Mibi06g2579 06 45929034 45931329 CCT
Mibi06g2579 06 45929034 45931329 Mibi06g2579 06 45929034 45931329 ECH