Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2517 ATGAGCCATCAAGAGAGAGACCAAACCAGCTCACTTGTCCCTATTCTGTTGAGTGCTCTGAGAAAATCAATGGTGTCATGTCGCATGTATCCACCAGACGATGTAATATCAGGCGCCGTCCCTCATGACTTGGAAACAGGATGGCCCACCGACGTTCAGCACATCACTCATGTCACTTTCGATCGCTTCAATGGCTTCCTCGGCCTCCCCGCCGACCTCCAGCTCCAGATTCCCGCTCCCGTTCCCAGCGCCAGTGCAAGCGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGGAATAGTATCCCAACGATTCTGTTGTTAATGCAGGAGCGTTTATACTCACAGGGAGGCCTAAAGGCAGAAGGAATTTTTCGCATAAACCCAGAGAACAGTGAAGAGGAGAATGTGAGGGAGCAGTTGAACAGGGGGGTTGTGCCGGATGACATAGATGTACATTGTTTGGCAGGCCTAATCAAGGCCTGGTTCCGAGAGCTCCCTTCTGGGATTCTAGACGGACTTTCTCCAGAGCAAGTTCTTCAGTGCAACACAGAAGAAGAATACGTTGAACTCGTCAAGCAATTAAAGCCTACCGAAGCTGCCCTGCTCAATTGGTCCGTTGATCTCATGGCTGATGTTGTTGAACATGAAGAACACAACAAAATGAATGCTAGAAATATCGCCATGGTTTTTGCTCCCAATATGACTCAGATGTCTGATCCACTAACTGCTCTGATGCACGCGGTCCAAGTGATGAACTTGCTCATGACTCTTATAATGAAGACACTCGCCGAACGAGAAGAAGCAGAGGGTTCACCCACGTCATTTCATTCATCTGGGGATGAATATGACAGTGAAGAAGAAATGGATACTAGTGATGGCGAAGAGGAAGAGGAAGCCGAACCATCGTTATGTGAGATAGAGGAAGAAGGGGAAGGGGAAGCACAACCATCATTATGTGAGATAGGAGAATATGCTATGTCATATACTGAAAGCGAAACCAGGAAATCCAGTTCCATTTCCAATTCTTCATGCGAAGAAAAGTCAGTGAGATCTAGTGTTGACTCGAGTAGTCCTTCCCTAAATTATGCAGGCGCCAATAACGTGGAGATCATTACTAAATTAACGGACTCGTTGCCCGCTGTCACCGTTTGCATCAAGTGA 1179 0.4707 MSHQERDQTSSLVPILLSALRKSMVSCRMYPPDDVISGAVPHDLETGWPTDVQHITHVTFDRFNGFLGLPADLQLQIPAPVPSASASVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSQGGLKAEGIFRINPENSEEENVREQLNRGVVPDDIDVHCLAGLIKAWFRELPSGILDGLSPEQVLQCNTEEEYVELVKQLKPTEAALLNWSVDLMADVVEHEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLMTLIMKTLAEREEAEGSPTSFHSSGDEYDSEEEMDTSDGEEEEEAEPSLCEIEEEGEGEAQPSLCEIGEYAMSYTESETRKSSSISNSSCEEKSVRSSVDSSSPSLNYAGANNVEIITKLTDSLPAVTVCIK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2517 392 MobiDBLite consensus disorder prediction 271 323 - -
Mibi06g2517 392 SUPERFAMILY GTPase activation domain, GAP 86 265 IPR008936 -
Mibi06g2517 392 CDD RhoGAP 108 266 - -
Mibi06g2517 392 CDD CRIB 45 84 - -
Mibi06g2517 392 MobiDBLite consensus disorder prediction 288 320 - -
Mibi06g2517 392 FunFam Rho GTPase-activating protein 5 76 269 - -
Mibi06g2517 392 MobiDBLite consensus disorder prediction 336 368 - -
Mibi06g2517 392 Pfam RhoGAP domain 108 242 IPR000198 GO:0007165
Mibi06g2517 392 ProSiteProfiles Rho GTPase-activating proteins domain profile. 91 272 IPR000198 GO:0007165
Mibi06g2517 392 SMART RhoGAP_3 105 268 IPR000198 GO:0007165
Mibi06g2517 392 Gene3D Rho GTPase activation protein 76 274 IPR008936 -
Mibi06g2517 392 SMART PBD_5 46 80 IPR000095 -
Mibi06g2517 392 PANTHER MKIAA1688 PROTEIN 4 350 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2517 Mibi-ChrMibi06 45403144 45405053 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1777 02 18329578 18332268 Mibi06g2517 06 45403144 45405053 CCT
Mibi06g2517 06 45403144 45405053 Mibi06g2517 06 45403144 45405053 ECH