Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2499 ATGGGTAAGGTTCTCCGAGAAACGTCTAAGCCATCCTCTAATTTTTCATCCCCATTCCCATCTTCGGCACCTGCCACAACCTCTTCGTCATCGGTTACCGATACTGTAAGGGGTTCTCACCAGTTCAAGATCTCGGGATATTCCCTATCAAAAGGGATCGGGATCGGCAAATACATAGCATCTGACACTTTTTCGGTCGGTGGCTATGAGTGGGCGATCTACTTTTATCCTGATGGGAAGAGTGTCGAGGACAATGCTACTTACGTATCACTATTTATCGCGCTTGCCAGTGAGGGGACGGACGTTAGGGCTCTTTTTGAGCTAACCCTTTTGGACCAGAGCGGGAAGGAGAGACACAAGGTTAATAGTCATTTCGAGAGGACTCTGGAAAGCGGGCCGTACACCTTAAAATATCGTGGCAGCATGTGGGGTTACAAGCGATTTTTCAAGAGAACAGCTCTGGAGACCTCAGATTACCTTAAAGATGATTGCCTCTGTGTTACTTGCAGTGTTGGTGTTGTGAGGTCATACACAGAGGGCCCTAAAATCTACTCCGTACCTATACCATCATCTGACATTGGCCAGCAATTTGGGCAGCTGCTTGAAAGTGAAAAAGGAAGTGATGTGAATTTTGAAGTTGATGGAGAATTTTTTCCTGCTCATAAATTGATATTAGCAGCTCGATCTCCTGTTTTCAGAGCCCAACTTTTTGGTCCCATGAAAGATCAGGACACTCGTTGTATAAAAGTTGAAGACATGGAGGCTCCTGTTTTTAAGGCTTTGCTTCATTTTATATACTGGGACTCGCTGCCTGACATGCACGAACTTACAGGGTTAAACTCCAAATGGGCAACAACGTTAATGGCTCAACATCTGTTAGCAGCAGCAGACCGGTATGGCTTAGAGAGGCTAAGGTTGATGTGTGAAGCCAATTTGTGTAAAGATGTTGCAATAAATACTGTTGCTACAACATTAGCATTGGCAGAGCAGCATCATTGTTTCCAGCTCAAAGCAGTCTGTCTCAAATTTATTGCGACACCTGAAAATCTCAGATCTGTGATGCAGACTGATGGTTTTGAGTACCTGAAGGAAAGTTGCCCATCTGTTCTGACTGAGCTCTTGGAGTACGTGGCTAGATTCACTGAGCTTTCGGACTTCATGTGCAAGGATATGAATGAAGCAATACTTGATGGCAGCGACATAAATGGGAGACGCGTGAAGCAAAGGCTCTAG 1233 0.4509 MGKVLRETSKPSSNFSSPFPSSAPATTSSSSVTDTVRGSHQFKISGYSLSKGIGIGKYIASDTFSVGGYEWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVNSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLCVTCSVGVVRSYTEGPKIYSVPIPSSDIGQQFGQLLESEKGSDVNFEVDGEFFPAHKLILAARSPVFRAQLFGPMKDQDTRCIKVEDMEAPVFKALLHFIYWDSLPDMHELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCEANLCKDVAINTVATTLALAEQHHCFQLKAVCLKFIATPENLRSVMQTDGFEYLKESCPSVLTELLEYVARFTELSDFMCKDMNEAILDGSDINGRRVKQRL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2499 410 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Mibi06g2499 410 SMART BTB_4 207 316 IPR000210 GO:0005515
Mibi06g2499 410 ProSiteProfiles MATH/TRAF domain profile. 37 171 IPR002083 GO:0005515
Mibi06g2499 410 MobiDBLite consensus disorder prediction 1 33 - -
Mibi06g2499 410 CDD BTB_POZ_BPM_plant 193 313 - -
Mibi06g2499 410 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 36 175 IPR008974 GO:0005515
Mibi06g2499 410 SUPERFAMILY POZ domain 184 314 IPR011333 -
Mibi06g2499 410 Pfam MATH domain 56 171 IPR002083 GO:0005515
Mibi06g2499 410 Gene3D Potassium Channel Kv1.1; Chain A 183 310 IPR011333 -
Mibi06g2499 410 Gene3D - 316 391 - -
Mibi06g2499 410 CDD MATH 38 171 IPR002083 GO:0005515
Mibi06g2499 410 SMART math_3 42 154 IPR002083 GO:0005515
Mibi06g2499 410 MobiDBLite consensus disorder prediction 7 33 - -
Mibi06g2499 410 CDD BACK_AtBPM-like 313 376 IPR034090 -
Mibi06g2499 410 SUPERFAMILY TRAF domain-like 34 173 - -
Mibi06g2499 410 FunFam BTB-POZ and math domain 1 183 310 - -
Mibi06g2499 410 Pfam BTB/POZ domain 198 314 IPR000210 GO:0005515
Mibi06g2499 410 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 27 374 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2499 Mibi-ChrMibi06 45233463 45236858 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1751 02 18015809 18019724 Mibi06g2499 06 45233463 45236858 CCT
Mibi06g2499 06 45233463 45236858 Mibi06g2499 06 45233463 45236858 ECH