Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2483 ATGGAACTCAGTAAACTCACCCTCGACATCTTCTCCAAACTCGAGCACAAATGGCTCTCCTCTCGCCGCGAAACCACCCGCAAAACCCGCATTCTCAGCATCGACGGCGGAGGAACCGCCGCCGTTGTCGCCGGCGCCGCCCTCCTCCGCCTCGAGGACCAGATCCGCCTCCAGACCCACGACCCCGACGCCCAAATCGCCGACTTCTTTGACATCATAGCCGGCACCGGAATCGGCGCCATCCTCGCGGCCATGATCGCGGCCGACGACGGCTCCGGCAGGCCCCTGTACACAGCAAGAGAAGCCGTAGGAGTGATCACACAGAGGAACTCTGAACTGTTCAAGCCAAAAAGATTCCTCCCAACGAGAGTTCTCCGCTGGCCTGGGAGACTATCTTCCAGAAGCATGGACAAGGTGGTGAAGGAGGTTTTCCGGAGAAGAGTGGACGGGAAAATGTTGACTTTAAGGGACACGTGTAAGCCGCTGCTCATTCCTTGCTTTGACCTCAAGAGCGCAGCCCCTTTCGTGTTCTCACGCGCTGACGCGTCGGAGTCGCCCAGTTTCAACTTCGAGCTGTGGAAGGTGTGTCGAGCCACGTCAGCGACGCCGAGCCTGTTCAAGCCTTTTGGGTTTAGCTCCGTGGACGGGAAGACGTCGTGCAGGGCGATCGACGGGGGACTTGTGATGAACAACCCGACGGCGGCGGCCGTCACGCACGTGCTTCACAACAAGCGTGAGTTCCCGTGGGTGAGTGGCGTGGGTGATCTGTTGGTGCTGTCCATAGGGAATGGGACATCATCTATCATGGGAGCTTCTTCCGGCAGGAAGGAGGAGACATTGTGTTCCATGTCGTCCATGGTTGGCATTGTGGTGGATGGTGTCTCCGACACTGTTGACCAAATGCTGGGGAATGCCTTCTCTTGGAACCGTACCGACTATGTCAGACTCCAGGCGTTGGGGGTGGGGGGTGGGGAGGAGGTGCTGAAGGAGAAAGGTGTGGAGTCGTTACCCTTTGGCGGGAAGCGGTTACTGAATGAGACTAACGGTCACAGAATCGATACCTTTGTCCACCGTCTTCTTTCTTCCCAAAATGTCAACCTCCCGCCCAGTTCTCCTAACGCAGCCGCCGTTAACCTCTCTGCGGCGGCGGCGGCGGCGGCGGCGGTTAGTTAG 1173 0.5848 MELSKLTLDIFSKLEHKWLSSRRETTRKTRILSIDGGGTAAVVAGAALLRLEDQIRLQTHDPDAQIADFFDIIAGTGIGAILAAMIAADDGSGRPLYTAREAVGVITQRNSELFKPKRFLPTRVLRWPGRLSSRSMDKVVKEVFRRRVDGKMLTLRDTCKPLLIPCFDLKSAAPFVFSRADASESPSFNFELWKVCRATSATPSLFKPFGFSSVDGKTSCRAIDGGLVMNNPTAAAVTHVLHNKREFPWVSGVGDLLVLSIGNGTSSIMGASSGRKEETLCSMSSMVGIVVDGVSDTVDQMLGNAFSWNRTDYVRLQALGVGGGEEVLKEKGVESLPFGGKRLLNETNGHRIDTFVHRLLSSQNVNLPPSSPNAAAVNLSAAAAAAAAVS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2483 390 SUPERFAMILY FabD/lysophospholipase-like 27 323 IPR016035 -
Mibi06g2483 390 Pfam Patatin-like phospholipase 32 236 IPR002641 GO:0006629
Mibi06g2483 390 PANTHER PATATIN-LIKE PROTEIN 6 1 367 - -
Mibi06g2483 390 CDD Pat17_PNPLA8_PNPLA9_like 48 318 - -
Mibi06g2483 390 Gene3D Cytosolic phospholipase A2 catalytic domain 16 367 - -
Mibi06g2483 390 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 32 237 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2483 Mibi-ChrMibi06 45079690 45080955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2483 1 378 Acyl Lipid Metabolism Gene Families AT3G63200 67.539 0.0 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1715 02 17581146 17582423 Mibi06g2483 06 45079690 45080955 CCT
Mibi06g2483 06 45079690 45080955 Mibi06g2483 06 45079690 45080955 ECH