Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2316 ATGGAGTCTCTGGCCACACTCCATCACTATCGCCAACCTCTTCGTTTCTCACCCATTCATCTTCCTTCTTCACTATCAACACCCTTATCTTCCTTCTCCTTCAGGTCTCTACCTCCCCGTATTTCGCCGCCGCAATTCTCGTCTTCCTCTTTCAGATCATCCTCCATCAGAGCCTCATTACCACAGTCTGAATCCTTCACTGGCTCTGCTTTCCGTAGGCCCCGAACCACATTACCACCGTTGCTTCAAACCCTAAACTCCCTTTTCTCACCCATCGTTCGAACTACCTGCACATTCGTAGCAGCGGCTGTGTTTTTCCACATGCGTCTTCACCTCAAGCCCGCCATTGCAGCACCGGTCGAGACGCCCACGGTGGAGTCGAGTACGGAATCGATGGAAAATACTTCCAATGAAGGAAATCAAAGAGCTGTTGATGAGAAATTAGGCAAGAGTGCTAACGATGCCGGGGCTCTTCGGTCGCTCATCGAGGAAAAGGTTAAGGCGCGCAAAATTGAGGAAGCGATCCAGGTTATAGACCGGTTAATTGAGCTGGAACCGGAAGAATTTGAGTGGCCATTGTTGAAGGCTCACATGTATGTTTACAATGGTGACTACGAATCAGCTAAAGGGAAGTTCGAAGAAATTCTGACGAAAGATCCGTATCGTGTCGAGGCATATCATGGCCTGGTGATGGCAGCTTCGGAATCGGATAAGCCGTTGGAGGATTTGTTGAAGAGGGTGGAAGAAGCAGTGGAACTGTGCAAAAAGCAAAAGCGGGAATCGGAAGTCAGGGATTTGAGGCTCTTGATTGCGCAGATTAAAGTCATGGAGGGAGAGCTTTCTGATGCTCTGAAGGCCTATCAGGAGCTTGTGAAGGAAGAACCAAAGGATTTCAGGCCTTACTTGTGTCAGGGTGTTATATATACTATTCTAAGAAAGAAAGATGAAGCAGAAAAGCAATTTGAGAAATTTTGGAGGCTTGTCCCTAAGAACCATCCTTACAGGGAGTATTTTGACGATAGCATGTTTGAAATGAATGGAATTTCACAGAAGGCAGAGAGGGAGGGAGCAGGTGCGAAGAACTGA 1086 0.4761 MESLATLHHYRQPLRFSPIHLPSSLSTPLSSFSFRSLPPRISPPQFSSSSFRSSSIRASLPQSESFTGSAFRRPRTTLPPLLQTLNSLFSPIVRTTCTFVAAAVFFHMRLHLKPAIAAPVETPTVESSTESMENTSNEGNQRAVDEKLGKSANDAGALRSLIEEKVKARKIEEAIQVIDRLIELEPEEFEWPLLKAHMYVYNGDYESAKGKFEEILTKDPYRVEAYHGLVMAASESDKPLEDLLKRVEEAVELCKKQKRESEVRDLRLLIAQIKVMEGELSDALKAYQELVKEEPKDFRPYLCQGVIYTILRKKDEAEKQFEKFWRLVPKNHPYREYFDDSMFEMNGISQKAEREGAGAKN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2316 361 MobiDBLite consensus disorder prediction 123 142 - -
Mibi06g2316 361 Coils Coil 240 264 - -
Mibi06g2316 361 Gene3D Tetratricopeptide repeat domain 120 347 IPR011990 GO:0005515
Mibi06g2316 361 Coils Coil 273 293 - -
Mibi06g2316 361 MobiDBLite consensus disorder prediction 123 144 - -
Mibi06g2316 361 Pfam Tetratricopeptide repeat 267 296 IPR019734 GO:0005515
Mibi06g2316 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 156 327 - -
Mibi06g2316 361 SUPERFAMILY TPR-like 166 332 IPR011990 GO:0005515
Mibi06g2316 361 SMART tpr_5 264 297 IPR019734 GO:0005515
Mibi06g2316 361 SMART tpr_5 298 331 IPR019734 GO:0005515
Mibi06g2316 361 SMART tpr_5 155 188 IPR019734 GO:0005515
Mibi06g2316 361 SMART tpr_5 189 222 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2316 Mibi-ChrMibi06 43446370 43447455 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1484 02 14804231 14805304 Mibi06g2316 06 43446370 43447455 CCT
Mibi06g2316 06 43446370 43447455 Mibi06g2316 06 43446370 43447455 ECH