Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1853 ATGGATGTGAGCGATGAGGCTAGTGTTGACCCCTTTTCAATTGGACCATCGACCATTATTGGTCGAACAATTGCTTTCAGAGTTCTTTTCTCCAAGTCCATGTCGCATTTCAGACACCAAATATTCAGTGTATTGTTAAATATCATAAACAGGTTTAGGGGATTTTGGGCACCAATTTTAACATGGTTGCATCCAAGAAATCCACAGGGCATATTATTGATGATGACTATGATTGCTTTTTTCTTGAGACGGTATACAAATGTGAAGACAAAGGCTGAAATGGCCTATCGGAGGAAATTTTGGAGAAACATGATGAGAACTGCATTGACCTACGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACTCCTAAGATGAATGAATCAGAATTTTACGACGTAGAGTTAGTAAGGAGTAAGCTGCAAGAGCTTCGCCACCGTAGGCAAGAGGGATCTCTTAGAGACATAATGTTTTGTATGCGTGCTGATCTTGTGAGAAATCTAGGTAATATGTGTAACCCCGAGCTTCACAAAGGTAGACTTCAGGTGCCCAAATTAATCAACGAGTATATTGATGAGGTGTCTACTCAGTTGAGAATGGTATGTGACTCTGATTCAGAGGAGCTCTCATTGACAGAAAAGCTTGCTTTCATGCATGAAACTAGACACGCGTTTGGGAGGACTGCTTTGCTGTTGAGTGGAGGAGCCTCTCTTGGAGCTTTTCATGTTGGTGTAGTTAAAACACTGGTAGAGCATAAACTCTTGCCTAGGATAATTGCTGGTTCTAGTGTAGGCTCCATTATGTGTTCCATTGTTGCTACTCGGTCTTGGCCTGAACTTCAAAGCTTTTTTGAGCATTCTTGGCACTCATTACAGTTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTGAAGAGGATCATGACACGAGGTGCTGTTCATGAGATTAGACAGTTGCAAATGATGTTAAGGCACCTGACTAGCAATCTTACATTTCAAGAAGCGTATGACATGACAGGTCGAATTCTTGGGATAACAGTTTGCTCTCCAAGAAGACATGAACCGCCTAGATGTCTCAACTACTTAACTTCACCCAATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAGCTGATGGCGAAGGATAGAAGTGGGGAGATTGTTCCTTACCATCCTCCATTTAATTTGGGCCCTGAGGAAGGATCTACACCGATACGTCGCTGGAGGGATGGGAGCCTGGAGATTGATCTACCTATGATGCAGCTAAAAGAGCTGTTTAATGTCAATCATTTTATTGTCAGCCAGGCCAATCCACATATTTCGCCATTGTTAAGATTGAAAGACTTAGTAAGAGCTTATGGAGGTAATTTTGCTGCCAAGCTTGCTCATCTCGTTGAGATGGAGGTGAAACATAGATGTAATCAGGTACTAGAACTTGGCTTTCCATTAGGCGGACTTGCAAAGTTATTTGCTCAAGACTGGGAGGGTGATGTCACTGTTGTTATGCCCGCAACTATTGCTCAGTACTCAAAAATTATACAAAACCCTTCTCATGCGGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGGTGCACCTGGGAGAAGCTTTCAGCCATAAAATCAAATTGTGGCATTGAGCTTGCTCTTGATGAATGTGTTGCTATTCTTAATCATATGAGAAGACTTGAGAGAAGTTCTGAAAGAGCAGCTGCCTCTTCTATTGGTCTGCCTAGTTCTGCCAAATTCAATGCTTCGAGAAGAATCCCTTCATGGAATTGCATTGCACGGGAGAACTCAGCTAGTTCCTTTGAGGAAGACCTAACAGATGTTGGTTCCTATCTGCATCAAGGTTCTGCAGGTAAAACTTGGAAAACCCATCATCCCTTACATGATGGAAGTGACAGTGAATCTGAGAGCGCCAATTTGAATTCTTGGACACGATCTGGTGGCCCCTTGATGAGAACTACTTCTGCAAACATGTTCATAGACTTTGTTCAAAACTTAGATGTTGATACTGACCTGAAGAAAGGCAAGGTAGCTCATCCGAACCCTCAAGTTTTCCAGCATAATCACAGTCCAAGGTTCAACACTACCGATAGGAGTTCTGAGGTCATAGAAATTGATCAAGAAATCGAGCATAGGAAATGA 2184 0.4258 MDVSDEASVDPFSIGPSTIIGRTIAFRVLFSKSMSHFRHQIFSVLLNIINRFRGFWAPILTWLHPRNPQGILLMMTMIAFFLRRYTNVKTKAEMAYRRKFWRNMMRTALTYEEWAHAAKMLDKETPKMNESEFYDVELVRSKLQELRHRRQEGSLRDIMFCMRADLVRNLGNMCNPELHKGRLQVPKLINEYIDEVSTQLRMVCDSDSEELSLTEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFEHSWHSLQFFDQMGGIFTVVKRIMTRGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRRHEPPRCLNYLTSPNVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTPIRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHISPLLRLKDLVRAYGGNFAAKLAHLVEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATIAQYSKIIQNPSHAELQKAANQGRRCTWEKLSAIKSNCGIELALDECVAILNHMRRLERSSERAAASSIGLPSSAKFNASRRIPSWNCIARENSASSFEEDLTDVGSYLHQGSAGKTWKTHHPLHDGSDSESESANLNSWTRSGGPLMRTTSANMFIDFVQNLDVDTDLKKGKVAHPNPQVFQHNHSPRFNTTDRSSEVIEIDQEIEHRK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1853 727 SUPERFAMILY FabD/lysophospholipase-like 228 572 IPR016035 -
Mibi06g1853 727 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
Mibi06g1853 727 Gene3D Cytosolic phospholipase A2 catalytic domain 220 446 - -
Mibi06g1853 727 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 53 570 - -
Mibi06g1853 727 CDD Pat_SDP1-like 162 569 - -
Mibi06g1853 727 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Mibi06g1853 727 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Mibi06g1853 727 MobiDBLite consensus disorder prediction 693 714 - -
Mibi06g1853 727 MobiDBLite consensus disorder prediction 633 660 - -
Mibi06g1853 727 MobiDBLite consensus disorder prediction 697 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1853 Mibi-ChrMibi06 39085500 39088783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1853 1 695 Acyl Lipid Metabolism Gene Families AT5G04040 79.886 0.0 1167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0972 02 9606731 9615833 Mibi06g1853 06 39085500 39088783 CCT
Mibi06g1853 06 39085500 39088783 Mibi06g1853 06 39085500 39088783 ECH