Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0938 ATGGGATTGCATGCAAAACTTTGGAACAACGTTGCTAGGCCTGCATGTGATGTGTTCATAAATCATCGTACGGTTGATACGAGACGTTCGGTGGTTCGGTTGCTGTACAATCATTTGACGCAGCGAGGATGCAAGCCATTCTTGGACGCAGAAAATCTGAAACCAGGAGATAGGTTGTTGGATACTATTGATGAATCTATACGAGGTTGTAATGTTGGGGTTGCTGTGTTTTCTCCTCGCTATTGTGAATCTTATTATTGTCTCCATGAGCTCTCACTTTTCATGGAAACAAAGAAACCAATCGTTCCCATTTTCTACAATGTCAAGCTGTCGCAGCTTCGAGTTGTGGACACTGAAATATTGAGATTTTCCCAGAAAGATTTGGAGAGGTTTCATTTGGCTATTGAAGAAGTTAAATGCATTGTGGGGCTTCCCTTCGACTCCACAAAAGAGTAA 456 0.4211 MGLHAKLWNNVARPACDVFINHRTVDTRRSVVRLLYNHLTQRGCKPFLDAENLKPGDRLLDTIDESIRGCNVGVAVFSPRYCESYYCLHELSLFMETKKPIVPIFYNVKLSQLRVVDTEILRFSQKDLERFHLAIEEVKCIVGLPFDSTKE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0938 151 Pfam TIR domain 18 119 IPR000157 GO:0007165
Mibi06g0938 151 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 116 IPR035897 -
Mibi06g0938 151 Gene3D - 8 137 IPR035897 -
Mibi06g0938 151 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 143 - -
Mibi06g0938 151 ProSiteProfiles TIR domain profile. 14 151 IPR000157 GO:0007165
Mibi06g0938 151 SMART till_3 15 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0938 Mibi-ChrMibi06 28776397 28776852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0938 11 147 Miscellaneous Gene Families AT1G57670 28.188 9.32e-14 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0941 06 28843078 28843566 Mibi06g0938 06 28776397 28776852 CCT
Mibi06g0938 06 28776397 28776852 Mibi06g0938 06 28776397 28776852 ECH