Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0811 ATGGCTTCGTCGGAGATCGAGGTGGTTTCATCGGACTCTAAAGCCCAGAAAAATTCGGACGCACCTCCTGTAGTAGACGTGTTCTCTGCCTGTTATTGTGGGGATTTTGAGAAATTGAGGTGGTTTGTGGAACAAGAAGGTGCCTCCGTTTCTGTACCTGATTCCAATGGCTATTATGCTCTCCAATGGGCTTCCCTTAATAATTTCCCAGATATTGTGCAGTATCTCATTAAGCATGGGGCTGATGTCAACGCTACTGACCACATGCAACAAACAGCACTACACTGGGCGGCAGTTCGTGGTGCAACTATAGTGGCTGACTTGCTCTTGGAGAATGGTGCTCGGCTTGAGGCTGCTGATATGCATGGTTACAGGGCAGTTCACGTTGCTGCTCAACATGGACAAACAGCTTTTTTAAATCACATCATTGCAAAATACAATGCTGACTTTGATGCACCTGATAATGAGGGACGAAGTCCTCTTCATTGGGCTGCATATAAGGGGTTTGCTGACACAATCCGATTGCTTCTATTCCGGGATGCGTGCCAAGAGAGAAAAGATAAAGATGGTTGTACGCCATTGCACTGGGCTGCACTAAGAGGAAATGCAGAGGCATGCACTGTGCTTGTACACTCAGGCACAAAGAAAGAACTGGTGGTGAAGGACAATGCTGGATTCACTCCTGTACAACTTGCACATGATAAAGGTCATCGGCATGTCGCCCTTTTCCTTTCTAAGCAACAGAGAGCTCTGAGCAACCGCTGGAGAGACAAAATTTGTAGTGGGAAGATGACAGATATTGGCTATGCTCCCATTTTATTTTGCATTATAATCTTTGAAATGTTCCTCTTCATCAACTCAGTTGTTACAGGTTCTAGTTTTCAAAAGATTACTGCTACTGCCGGTCTTTGGGCTTGGACAGCTCTTTCTCTGGCAGTTGGTACTCTGATTATGTTCTATAGGTGCAGTAGTAAAGATCCTGGTTATATAAAACGATCAGGAGATTCAGGTGCTCATAGTGATTCAGAGGATCCTTTATTGAATATTGACCTGAACAGCTCCTCTGTTTGGACAGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAGTAAGGGCTGTACGATCTAAGCATTGCCCTACTTGTAAGCGTTGTGTGGAACAGTTTGACCACCATTGCCCATGGATATCTAACTGTGTGGGAAAGAGGAACAAGAGGGATTTCTTTATTTTTGTCTGTATGGCAACTTTGACATCATTCATCAGCGGTGCTGTTACAGTTCAAAGAATTCGGACATCATCAATAGGACTGTCAGAAGGAGAAACATGGATTCATCATATGCTAGTACAGCATCCTGGTGCTATTGTTTTTCTGGTGCTGGACCTTTTTATTTTCATTGCTGCTGTAACTTTGACGTCAACACAAGCTTCAATGATAGCTCGGAATATCACCACAAATGAAGTAGCAAACTCTACTCGATATGTGTATCTTCGTGGTCCTGATGGGAAGTTTAGAAATCCATACAACCATGGCTGTTGGAAGAATTGTTCTGACTTCTTTTTTAAGGGCTATACAGATGATGATGACATTGCTTGGCCTCCATTACAGCGGGCAGCGACATAG 1623 0.4393 MASSEIEVVSSDSKAQKNSDAPPVVDVFSACYCGDFEKLRWFVEQEGASVSVPDSNGYYALQWASLNNFPDIVQYLIKHGADVNATDHMQQTALHWAAVRGATIVADLLLENGARLEAADMHGYRAVHVAAQHGQTAFLNHIIAKYNADFDAPDNEGRSPLHWAAYKGFADTIRLLLFRDACQERKDKDGCTPLHWAALRGNAEACTVLVHSGTKKELVVKDNAGFTPVQLAHDKGHRHVALFLSKQQRALSNRWRDKICSGKMTDIGYAPILFCIIIFEMFLFINSVVTGSSFQKITATAGLWAWTALSLAVGTLIMFYRCSSKDPGYIKRSGDSGAHSDSEDPLLNIDLNSSSVWTGNWSQLCPTCKIVRAVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFVCMATLTSFISGAVTVQRIRTSSIGLSEGETWIHHMLVQHPGAIVFLVLDLFIFIAAVTLTSTQASMIARNITTNEVANSTRYVYLRGPDGKFRNPYNHGCWKNCSDFFFKGYTDDDDIAWPPLQRAAT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Mibi06g0811 540 MobiDBLite consensus disorder prediction 1 18 - -
Mibi06g0811 540 Gene3D - 143 250 IPR036770 -
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Mibi06g0811 540 ProSiteProfiles DHHC domain profile. 363 413 - -
Mibi06g0811 540 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 20 524 - -
Mibi06g0811 540 FunFam S-acyltransferase 11 142 - -
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Mibi06g0811 540 SMART ANK_2a 189 218 IPR002110 GO:0005515
Mibi06g0811 540 SMART ANK_2a 224 253 IPR002110 GO:0005515
Mibi06g0811 540 SMART ANK_2a 56 85 IPR002110 GO:0005515
Mibi06g0811 540 SMART ANK_2a 156 185 IPR002110 GO:0005515
Mibi06g0811 540 SMART ANK_2a 122 152 IPR002110 GO:0005515
Mibi06g0811 540 SMART ANK_2a 89 118 IPR002110 GO:0005515
Mibi06g0811 540 Pfam Ankyrin repeats (3 copies) 29 119 IPR002110 GO:0005515
Mibi06g0811 540 Pfam Ankyrin repeats (3 copies) 128 216 IPR002110 GO:0005515
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Mibi06g0811 540 FunFam S-acyltransferase 143 251 - -
Mibi06g0811 540 MobiDBLite consensus disorder prediction 1 21 - -
Mibi06g0811 540 Pfam DHHC palmitoyltransferase 363 490 IPR001594 GO:0016409
Mibi06g0811 540 Gene3D - 3 142 IPR036770 -
Mibi06g0811 540 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Mibi06g0811 540 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0811 Mibi-ChrMibi06 26914614 26922947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0811 56 256 Miscellaneous Gene Families AT5G60070 28.095 9.39e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0811 06 26914614 26922947 Mibi06g0811 06 26914614 26922947 ECH