Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0808 ATGGGGGCAAGATGCCTTAATCTTCTTACAAAAGCACCTAAGATGGAGCTGAATAGCATTAGAGATGCATTTGACCGTGTATCTAAAAAGCAAAAGTTGTCTACTTCTAAGTTCCAAGAAATTATTGATCAGGTGGGGCTTGAAATTGAACAGGCTTTGGTGAAAATTCAGTCGGTTCAAGATTTAGCCCCTGCAGACCAGAAATCTATACTTACAGATCTTAAGTTTAAACTTGATGCTATTGGGGCGCTTCAACAGTTAGAAGGACCACAGAAAGAATTGAACATAAGTCTTACGAAGTACCAAAAGCTTCTGGAGAAATCCTTAAATCCTGATGTATCCAAGGCATACAGAAATGTTGACTTTGACTTTCATATTGTGAATCAGATTATTGCAAACCATTTTTACCGTCAAGGGCTATTTGATCTTGGAGATAGCATCATAAATGAGGCTGGAGAGTCAAATTCAAATTCGTTAAGATCTCAATTCCTGGAAATGCATCAGATTCTTGAAGCTATGAGAGTTAAGAACCTTCAACCTGCTCTTGCATGGATCTCTAGTAACCGAGCTAAACTTGTTCAGAGTGGTTCCATTCTTGAGCTTAAGCTTCATACGCTGCAGTATGTAGAGGTTTTGCAAAATGGAACTCGAGATGAAGCCTTATATTATGCCCGAACTCATCTTACTCCTTTTGCTCCCTCCCACCCGGATGAGTTTAATAAGCTTATGGGTTGCCTCTTGTATGTAGGAAGGCTTGACAACTCCCCTTATTCTGAGTTGATATCCCAATCCCAAACCCACTGGGAGAGGGCTACTAAAGAGTTGACACGGCAGTTCTGCGTTCTCCTGGGACAGTCCTATGAGAGCCCATTGAGTGTGGCAGTTGCTGCCGGAGTTGAAGGGTTGCCTACACTCTTGAAACTGGCAAATGTAATGGCCGCAAAGACGCAAGAGTGGCAGGCAATGAAACAGTTGCCAGTGTCTGTAGAACTGGGGAAGGAATTTCAGTTCCATTCTATTTTTGTCTGCCCCGTGAGTCGTGATCAAGCAAGTGAAGAGAATCCTCCAATGTTGCTTCCATGTTTACATGTTCTTTGCAAGCAATCAATTATGAAGTTGTCGAAAAGCAGCACCCGAACATTCAAGTGTCCTTACTGCCCAGCAGATGCTACAGTTGCACAGTGCAAACAGCTCCATTTCTGA 1203 0.4256 MGARCLNLLTKAPKMELNSIRDAFDRVSKKQKLSTSKFQEIIDQVGLEIEQALVKIQSVQDLAPADQKSILTDLKFKLDAIGALQQLEGPQKELNISLTKYQKLLEKSLNPDVSKAYRNVDFDFHIVNQIIANHFYRQGLFDLGDSIINEAGESNSNSLRSQFLEMHQILEAMRVKNLQPALAWISSNRAKLVQSGSILELKLHTLQYVEVLQNGTRDEALYYARTHLTPFAPSHPDEFNKLMGCLLYVGRLDNSPYSELISQSQTHWERATKELTRQFCVLLGQSYESPLSVAVAAGVEGLPTLLKLANVMAAKTQEWQAMKQLPVSVELGKEFQFHSIFVCPVSRDQASEENPPMLLPCLHVLCKQSIMKLSKSSTRTFKCPYCPADATVAQCKQLHF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0808 400 SMART toby_final6 215 311 IPR013144 -
Mibi06g0808 400 ProSiteProfiles Gid-type RING finger profile. 343 386 IPR044063 GO:0061630
Mibi06g0808 400 SUPERFAMILY RING/U-box 337 394 - -
Mibi06g0808 400 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 162 219 IPR006595 -
Mibi06g0808 400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 400 IPR013083 -
Mibi06g0808 400 SMART ctlh 162 219 IPR006595 -
Mibi06g0808 400 FunFam Regulator of gluconeogenesis Rmd5 335 399 - -
Mibi06g0808 400 PANTHER MACROPHAGE ERYTHROBLAST ATTACHER-RELATED 12 398 IPR045098 GO:0004842|GO:0043161
Mibi06g0808 400 SMART ring_2 343 386 IPR001841 -
Mibi06g0808 400 CDD dRing_Rmd5p_like 341 388 IPR037683 -
Mibi06g0808 400 Pfam RING-type zinc-finger 343 384 IPR027370 -
Mibi06g0808 400 ProSiteProfiles Zinc finger RING-type profile. 343 386 IPR001841 -
Mibi06g0808 400 Pfam CTLH/CRA C-terminal to LisH motif domain 162 305 IPR024964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0808 Mibi-ChrMibi06 26842035 26843376 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0808 06 26842035 26843376 Mibi06g0808 06 26842035 26843376 ECH