Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1652 ATGAGTGCAGTTCCAAAAGAGTCGATTGAAGTCATTGCGCAGACAATTGGCATCACCAATTTGTCCCCTGATGTTGCCCTTGCTCTCGCCCCCGATGTGGAGTATAGGGTTCGGGAAATTATGCAGGAGTCTATAAAATGCATGCGCCACTCAAGGCGAACTGTTCTTACGGCAGATGATGTGGATAGTGCACTTAAATTAAGAAATCTGGAACCGATGTATGGTTTCACCTCTAATGATCCTCTGCGGTTTAAAAGAGCTGCTGGACACAAGGATTTGTTCTACGTTGATGATAAAGATGTTGATTTTAAGGATGTAATTGAAGCACCATTGCCAAAAGCACCTCTTGATGCATCAGTTACATCTCATTGGCTGGCAATAGAAGGTGTACAGCCTGCAATTCCTGAAAATGCTCCCACTGAAGCTCCCTCTGAAATAAGAAAATCTGACTACAAGGAAGATGGAGTTTCTGTTGATATTAAATTACCTGTTAAACATGTAGTTTCAAGAGAGCTTCTGCTTTACTACAACAAAATAACTGAGCTGATATTAAACAAGCCAAGCACCATTCTCTTTAGTAGAGCATTAATTAGCTTGGCAACAGATTCAGGGCTCCATCCTTTGGTTCCTTATTTCTCATACTTTGTTGCTGATGAGGTCGCACGAAATTCAAATAATTTAAATATTTTATTTGCTTTGATGCATCTTATTCGGAGCCTCACACAAAATCCTCACATCCACATTGAGCCTTATTTACATCAATTGATGCCGTCTATTATGACCTGCCTTGTTGCAAAAAGGCTTGGGAATGGACTAACTGATAATGACTGGGAACTCAGAAACTTCAGCGCAAACTTGGTCGGTTCAATATGCAAAAGATTTGGGCATGTTTATCATAACCTTCAGCCACGTGTGACAAAGACATTGCTTCATGCCTTCTTGGACCCTACAAAATCTCTACCTCAACATTATGGTGCAATTAAAGGGATAACAGCTCTTGGATCCAGCACGGTTCGCATGCTGATTCTTCCAAATCTTGAGGCATATCTGCTTCTTCTTGAGCCAGAAATGCAACTTGAGAAGCAAAAAAACGCATTAAAGAGGCATCAAGCATGGCAAGTTTATGGAGCGTTGCTGTGCGCAGCAGGCCAATGTATTCATGAAAGGGGCAAAGTGTACAGCCGTATGCTCCTTCCTGCTTCTAGTCGTGCTTTTTCAAGAGGCTATGGAAAAGTCACGATGGCAAAGACAAGCAAACGTAAAGCCAGCACAGACAATCTAGTGCAGCAACCTCCATTGAAGAAAATTGCAACAGATGTTTCTGGGGGATTGATGCCAATGAACTCCTTGCCGGTTGATATGCAAGGCACACCAGGGGGATTTTCCCACACAATGGGAGTTCCTAACGCCGGAATATCCTCGATGGCTCGTCAGTCATTAAATGAAAAAAACCAAGGAAGAGAGGTTGGAGGTCAATTAGGGCAGGTATCAGCAACTCTTGCTCAGGCTTGGAAGGATGACATTGATGCTGGACATTTGCTATCTTCTGTGCATGAACTATTTGGCCACAGTGTATACTCCTTTATCCCAAAAGCTGAAGCATTTATATCATTGTGA 1617 0.4249 MSAVPKESIEVIAQTIGITNLSPDVALALAPDVEYRVREIMQESIKCMRHSRRTVLTADDVDSALKLRNLEPMYGFTSNDPLRFKRAAGHKDLFYVDDKDVDFKDVIEAPLPKAPLDASVTSHWLAIEGVQPAIPENAPTEAPSEIRKSDYKEDGVSVDIKLPVKHVVSRELLLYYNKITELILNKPSTILFSRALISLATDSGLHPLVPYFSYFVADEVARNSNNLNILFALMHLIRSLTQNPHIHIEPYLHQLMPSIMTCLVAKRLGNGLTDNDWELRNFSANLVGSICKRFGHVYHNLQPRVTKTLLHAFLDPTKSLPQHYGAIKGITALGSSTVRMLILPNLEAYLLLLEPEMQLEKQKNALKRHQAWQVYGALLCAAGQCIHERGKVYSRMLLPASSRAFSRGYGKVTMAKTSKRKASTDNLVQQPPLKKIATDVSGGLMPMNSLPVDMQGTPGGFSHTMGVPNAGISSMARQSLNEKNQGREVGGQLGQVSATLAQAWKDDIDAGHLLSSVHELFGHSVYSFIPKAEAFISL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1652 538 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 2 533 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Mibi05g1652 538 SMART TAF_cls 2 68 IPR004823 -
Mibi05g1652 538 SUPERFAMILY ARM repeat 222 349 IPR016024 -
Mibi05g1652 538 CDD TAF6C 165 381 IPR011442 GO:0006367
Mibi05g1652 538 Gene3D Histone, subunit A 1 67 IPR009072 GO:0046982
Mibi05g1652 538 Gene3D - 164 369 IPR046344 GO:0006367
Mibi05g1652 538 Pfam TAF6 C-terminal HEAT repeat domain 259 346 IPR011442 GO:0006367
Mibi05g1652 538 FunFam transcription initiation factor TFIID subunit 6 164 369 - -
Mibi05g1652 538 FunFam transcription initiation factor TFIID subunit 6 1 66 - -
Mibi05g1652 538 Pfam TATA box binding protein associated factor (TAF) 1 66 IPR004823 -
Mibi05g1652 538 SUPERFAMILY Histone-fold 2 66 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1652 Mibi-ChrMibi05 19875566 19880072 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1652 05 19875566 19880072 Mibi05g1652 05 19875566 19880072 ECH