Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1602 ATGGATGAAGGTGAGGGAGGGTATGGTGAGAGTGGGGATCCGATGGATCAGTTCCATCGCAACGAGGCGATATCAGCTGTAGCTGATGACGGATTTTTGGCCGAGGAGGACGATGATTACGAGGACCTTTACAACGACGTTAATGTCGGCGAAGGGTTCCTTCAGTCTTTAAGGAAGAACGACGATTCCGGGTTTCGGAACGAGGAGGTCGAGGAGAAAAAGCCTCAACCAGCCGCCGCCACGGTGATTCCGGAAACCGGCGGCGTTTCGATCCCGGGTGTCGGTGTCGGTGGCGGTGCCGGTGGTGAGGCCGCGGCGGCCGCTGGGGTTATGGATGCGGCGTCTAGGGTTCCGGGACGAGTAGATGGGATTCAAAATCAAGGGTTTAGAGGGAATGAGATGGGTGTGAAAGCTGGTGGTGGATCGGGTGCCTCTATGGGTGGTGGCGGTGGTGGTGGGATGAGGGTTGAATTAGGGCAACAACAGGGTAAGTTGAATGAGATAGAGGAGCAGAGTGGTAATAATAGTGTAGTAGTACAAGGCATGGGGCAGCAACCTCATGGTGGAGTTGTTGGGAGCTTGGGAAATGAGAATTTGATGAGGCAAGGTGTTGGAGGAGGAAATATCAATAGGGCTGGTGGCAATGGGGTTGGGAGCAATGCGAGTGTTGTCAATGTTGTCAATACAGGAGGAGGAACTGCTGTTCCGGGTGCGGGTGGCGGTGGTGGTGCTGGAAGTGGTGGCGGGGGCACTATTTTATTTGTGGGTGAATTACACTGGTGGACTACTGATGCTGAGTTGGAGGCTGAGCTTTGTAAGTATGGGCCAGTGAAGGAGGTGAAATTTTATGATGAGAAGGCTAGTGGTAAGTCGAAAGGGTATTGTCAGGTTGAGTTTTATGATCCTTCTCACGCATCTGCTTGTAAAGAAGGGATGCATGGGCATTTGTTTAATGGGCGACCATGCGTTGTTGCTTTTGCCTCTCCTTTTACTGTTAAGAGAATGGGAGAGGCTCAGGTGAGCAGGAATCAGCAGATAGCTCAAACTACTGGTTCTCAGACTAGGAGAGGACCTGCTGATTCAGGGGCTAAGACAGGTGGGAATAACATTACTACTGGTGGAAACTACCAAGGTGGAGATGGCAACAGAAACTATGGGAGAGGTAACTGGGGGAGAGGGAATAATCCTGGGATGGGTAATAGGGGCCCTGTTAATCCAATGAGGAATAGAGGTGGTGGAATGGGGGGTAGAGGTATCATGGGTAATGGTGGGAATGGATTTGGACAAGGTATTGGTGCCACCCCACCTCTGTTGCACCCTCAGTCAATGATGAATCAGGGTTTTGATCCCGCATTTGGTGGGCCTATGGGTAGAATGGGTGGCTATGGAGGCTTTCCAGGTGCTCCAACTCCTCCATTCTCTGGCATTTTGCCTTCATTCCCCGGAGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAACCCAGCCTTTTTTGGAAGAGGGATGCCCATGAATGGTATGGGGATGATGCCCACTTCAACCGTTGATGGGCCTAATATGGGGATGTGGTCAGATCCAAATATGGGTGGATGGGGTGGTGAAGAGCATGGTGGTGGAAGAGCTGGAGAGTCGAGTTATGGTGAGGAAGCTGCATCAGAACATCAGTATGGTGAGGTGAGTCATGATAGAGCTGGTTGGCCAAATGCCGTGAGGGAAAAGGACAGAGGATCTGAAAGGGACTGGTCTGGCTCTTCTGAACGAAGGTACAAGGATGATAGAGATCCAGGATATGAGAGAGATGCGCCTAGAGAGAAAGAAATGGGGCAGGACCACGAATGGTCTGAAAGAAGACATCGTGATGATAGAGAAGTGGGTCGTGAACGTGATAGGGAGCGTGACCGTGATCGTGAACGCTCTCGTGACCGTGACCGTGACCGTGAGAGGGATCGTGAAAGAGATCGTGAACGTGATAGGTACAAGGAAGAAAGGGACAAATATGCTGACCATCATAGATACAGAGATCGCGAAGCAGATCATGAGGATGAATGGGAACGGGGGCGGTCATCAAGGACTCACAGCAAATCAAGATTATCACAAGAGGACGATCATCATTCTAGAGCTAGGGACGCTGATTATGGAAAAAGGAGACGTCTTACATCTGAGTAA 2172 0.5101 MDEGEGGYGESGDPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRNEEVEEKKPQPAAATVIPETGGVSIPGVGVGGGAGGEAAAAAGVMDAASRVPGRVDGIQNQGFRGNEMGVKAGGGSGASMGGGGGGGMRVELGQQQGKLNEIEEQSGNNSVVVQGMGQQPHGGVVGSLGNENLMRQGVGGGNINRAGGNGVGSNASVVNVVNTGGGTAVPGAGGGGGAGSGGGGTILFVGELHWWTTDAELEAELCKYGPVKEVKFYDEKASGKSKGYCQVEFYDPSHASACKEGMHGHLFNGRPCVVAFASPFTVKRMGEAQVSRNQQIAQTTGSQTRRGPADSGAKTGGNNITTGGNYQGGDGNRNYGRGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSTVDGPNMGMWSDPNMGGWGGEEHGGGRAGESSYGEEAASEHQYGEVSHDRAGWPNAVREKDRGSERDWSGSSERRYKDDRDPGYERDAPREKEMGQDHEWSERRHRDDREVGRERDRERDRDRERSRDRDRDRERDRERDRERDRYKEERDKYADHHRYRDREADHEDEWERGRSSRTHSKSRLSQEDDHHSRARDADYGKRRRLTSE 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1602 723 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 251 329 IPR000504 GO:0003723
Mibi05g1602 723 MobiDBLite consensus disorder prediction 341 379 - -
Mibi05g1602 723 MobiDBLite consensus disorder prediction 556 723 - -
Mibi05g1602 723 SUPERFAMILY RNA-binding domain, RBD 249 343 IPR035979 GO:0003676
Mibi05g1602 723 MobiDBLite consensus disorder prediction 518 723 - -
Mibi05g1602 723 MobiDBLite consensus disorder prediction 341 403 - -
Mibi05g1602 723 MobiDBLite consensus disorder prediction 1 22 - -
Mibi05g1602 723 SMART rrm1_1 252 325 IPR000504 GO:0003723
Mibi05g1602 723 MobiDBLite consensus disorder prediction 61 75 - -
Mibi05g1602 723 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 253 322 IPR000504 GO:0003723
Mibi05g1602 723 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 20 663 IPR034772 -
Mibi05g1602 723 MobiDBLite consensus disorder prediction 55 80 - -
Mibi05g1602 723 CDD RRM_CFIm68_CFIm59 253 326 - -
Mibi05g1602 723 Gene3D - 245 387 IPR012677 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1602 05 19313906 19316077 Mibi05g1602 05 19313906 19316077 ECH