Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1400 ATGAGTTACCAAACAGTAGGGCAGATGACCAAAAACGAACAAAACATGGTAAAGCACCCTTCACGGTCAAATGAAGAATTTAGGATAGCTAGTTTCTCAGCTCCATTAGATTTAGCCCTATCTTCTTCTTCTTATACATTCTTTATTCCATTACAAGATTCCATTTCATCCAGATTTATGGAGCTGCTAACACTATTGTTATCTTTTCTACTAACGCTTCACTCATCCCTATTAGGAGTTTCTTCAACGACATTCACCATGGTTAACAAATGCAGTTACACAGTATGGCCAGGAATTCTTTCAAACGCCGGAGTACCACCTCTCTCCTCCACCGGTTTCATCCTCCAAACCGGAGAATCCAAAACAATCTCAGCACCAACCTCCTGGGGAGGCCGATTCTGGGGAAGAACTCAGTGCGCACAAGACTCCACCGGAAAATTCACATGCCTCACCGGCGATTGCGGCTCCGGCAAGCTAGAATGCGCCGGAAAAGGAGCCTCACCGCCGGCAACATTAGCAGAATTCACTTTAGACGGTGCCGGAGGCCTCGATTTCTTCGATGTGAGCTTGGTTGACGGTTATAACGTACCTATGATGGTGGTTCCTCAAGGCGGTTCCGGCGATAACTGTACAAGTACGGGCTGTGTTTCAGATCTGAACGGCGCGTGTCCTTCGGAGTTGAAGGTGATGAGTACGGATGGGAGTGAAGGTGTCGCGTGTAAGAGCGCGTGTGAGGCGTTTGGGTCGCCGGAGTATTGTTGCAGTGGCGCGTATGGATCGCCGAATACTTGTAAACCGTCGTCGTACTCGCGGATTTTCAAGAGCGCGTGCCCACGCGCTTATAGCTATGCCTATGATGATAAAACGAGCACGTTCACATGTGCGGCTGCCGATTATACCATCACTTTTTGTCCATCACCTAACACCAGCCAGAAAGCATCACAAGGGCAAAACCCGAACAGCCCGTCGGCGCCGGCGGCTCCGAGCTTGCCGGCGGCTGATTCAAACAGCCCCATGGTGTATGAAGGAGCTGCTTTTGATCAAAGCTTGTTATCAGCCTCCACGTTTATCCACGTGTCACAATCCCAAATCATAGCCGGCATTGTTACTGTAGCTGCGGCATTTTGGGGATTCTGA 1137 0.4952 MSYQTVGQMTKNEQNMVKHPSRSNEEFRIASFSAPLDLALSSSSYTFFIPLQDSISSRFMELLTLLLSFLLTLHSSLLGVSSTTFTMVNKCSYTVWPGILSNAGVPPLSSTGFILQTGESKTISAPTSWGGRFWGRTQCAQDSTGKFTCLTGDCGSGKLECAGKGASPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMMVVPQGGSGDNCTSTGCVSDLNGACPSELKVMSTDGSEGVACKSACEAFGSPEYCCSGAYGSPNTCKPSSYSRIFKSACPRAYSYAYDDKTSTFTCAAADYTITFCPSPNTSQKASQGQNPNSPSAPAAPSLPAADSNSPMVYEGAAFDQSLLSASTFIHVSQSQIIAGIVTVAAAFWGF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1400 378 MobiDBLite consensus disorder prediction 310 334 - -
Mibi05g1400 378 ProSiteProfiles Thaumatin family profile. 82 305 IPR001938 -
Mibi05g1400 378 CDD TLP-PA 84 304 - -
Mibi05g1400 378 SMART tha2 85 305 IPR001938 -
Mibi05g1400 378 FunFam THAUMATIN-LIKE PROTEIN 1 83 305 - -
Mibi05g1400 378 ProSitePatterns Thaumatin family signature. 145 161 IPR017949 -
Mibi05g1400 378 MobiDBLite consensus disorder prediction 1 20 - -
Mibi05g1400 378 SUPERFAMILY Osmotin, thaumatin-like protein 83 306 IPR037176 -
Mibi05g1400 378 Gene3D Thaumatin 83 305 IPR037176 -
Mibi05g1400 378 Pfam Thaumatin family 89 305 IPR001938 -
Mibi05g1400 378 PANTHER OS03G0233200 PROTEIN 70 305 IPR001938 -
Mibi05g1400 378 MobiDBLite consensus disorder prediction 1 17 - -
Mibi05g1400 378 PRINTS Pathogenesis-related protein signature 132 143 IPR001938 -
Mibi05g1400 378 PRINTS Pathogenesis-related protein signature 84 96 IPR001938 -
Mibi05g1400 378 PRINTS Pathogenesis-related protein signature 184 200 IPR001938 -
Mibi05g1400 378 PRINTS Pathogenesis-related protein signature 295 304 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1400 Mibi-ChrMibi05 16648116 16652072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1400 59 306 Receptor kinase-like Gene Family AT5G38280 54.183 2.79e-92 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1400 05 16648116 16652072 Mibi05g1400 05 16648116 16652072 ECH