Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1393 ATGGCATTGCTCAGAAGCTACGCGGAGCATCTACGAAGGAACAAGGAAACAGAGACTTTTGCCAATATCATTCTCTTTCCCGGAACTGTGTCGGCTTCATCAGTGTGTTTCTGCTCCGGTGTTCCCATAACTCCGATCGAAGCTTCATCTCTTAATTCTTCAGCAAAGATCTCTGAAATCGGAGCCACCATCATCTTCACCATGCAACACGGAGACTACAGCTCATCTCCTTATTACCAATTCCCTCCGATCCCCAACCCAATCCCTAATCCGAATCCCAATCCAAACCCTAACCCTAACCCTATCCCTCCCGATTCACTCCCAAATCAGTTCGCTTCAGCTCCTCCTTTCTCCTCCGATTACTCTCCTTATGCCCCTAATTACCCTCCTTATTCTCAAAATCCCGATCCTGTCCCTGTCCCTCCCACTGCCCCTTCTTTCCCTCCTTCCTCCAATCCCAATTTGAACTCTTTCAGTTCTCCCCCTCAACCTTCTTCTTTTCCTCCCTTCGAATCCCACGTCCCTTATCAACAACCTCCACAACAACAATCTCAATATCCTCCCTATGATCAACATCAATCGGCTCCAAGTTATTCACCACCTTCTAACCCCTCTCCCGCTTCGTCCTTCTATCCGGCTTCTTCTTATGCTCATCCTGGATCGTCAATTCCTCCTACTTATGATAATCTCTATGAGAATTCCGTGAAATTTGATTATGGGGGTGCTTATGTTGATGATAAGTTTGGGAGTTTTAATCGGAGCCGGTCTGATTTTGGGTCCGATTTGTATGGGAAGCGGCCGGAGACGAGGCATGAGGCGGTTCGTGATGATGTTTATGGAGATGGTGTGTTTGCCTATAGAGGGGGTGAATCGGAACCGTATGGGGCGCGGGGTACGGCTCCTAAGTCTTCAACTTGGTCTGGTTTTGATGACTATGGGAGGTCTATTAGTTTTCCCTCTGCGAAAGAACCCTCTTTTTCAAACAAGGTTGTGAAAGCTGTGCCTAAGGTTGATGCCCAAGAGGATGTTAAAGGTGGAGTGCAAAAGTTTCGTGTTAAGATATTGGCAGAAAGTGGTGGTCAGAGCACCTTGGATGTTCTCTGTCAGATTAGTTTGGATGGAATTCGTATGTTGGATCCAAGTACCAGCCGGACGTTGAGAATTTATCCTCTTGAGAACATCACGAGATGTGACAAATTCGATTCCACTACCCTTGCATTTTGGTCCAAGAGTCCAGTTGACATTGAGCCAAGACGAATCAGATTGCAATCCAATAGCTACACCAATAACACTCTATTGGATACAATTACTGCTGCAATCATACAGTTTAAGGAAATGGGTGGAAGTAGGAGGCCTGTTGAATCATTGAAAACTAATGAACAACCTTCTGAAAAGAAGAAAGGCCTTGTTGATTGGATGAATATCATCAGACCTGCTAATGAAGAGAAAGATCATTGGGTCCCGGATGAAGCAGTTTCAAAATGCACAGCATGTGGGACTGATTTTGGGGCTTTTGTTCGCAAGCATCACTGTAGGAACTGTGGGGATATTTTCTGTGACAAATGCACACACGGTAGAATTGCTCTAACTGCCGATGATAATGCTCAGCCAGTAAGAGTTTGTGACCGATGCCTGGCTGAAGTGACACAGAGGCTCAGTAATGCTAAGGAGGCTGCAAACAAGCCTGTATCACAAAGTCATGAGGATCTTGCGAGGAAACTTCAGGAGGAGCTGGAGAGGAATCGGAGGACATCGGGTTCTAAGTCTGATGGATCTGGAAGGCGGATGAAGGAAGTTGAATGCCCTACTTGCACAGTCCATCTGCAGGTCCAAGTACCTAGCTCGGGCTCAGAGACCATTGAGTGTGGGGTTTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1905 0.4656 MALLRSYAEHLRRNKETETFANIILFPGTVSASSVCFCSGVPITPIEASSLNSSAKISEIGATIIFTMQHGDYSSSPYYQFPPIPNPIPNPNPNPNPNPNPIPPDSLPNQFASAPPFSSDYSPYAPNYPPYSQNPDPVPVPPTAPSFPPSSNPNLNSFSSPPQPSSFPPFESHVPYQQPPQQQSQYPPYDQHQSAPSYSPPSNPSPASSFYPASSYAHPGSSIPPTYDNLYENSVKFDYGGAYVDDKFGSFNRSRSDFGSDLYGKRPETRHEAVRDDVYGDGVFAYRGGESEPYGARGTAPKSSTWSGFDDYGRSISFPSAKEPSFSNKVVKAVPKVDAQEDVKGGVQKFRVKILAESGGQSTLDVLCQISLDGIRMLDPSTSRTLRIYPLENITRCDKFDSTTLAFWSKSPVDIEPRRIRLQSNSYTNNTLLDTITAAIIQFKEMGGSRRPVESLKTNEQPSEKKKGLVDWMNIIRPANEEKDHWVPDEAVSKCTACGTDFGAFVRKHHCRNCGDIFCDKCTHGRIALTADDNAQPVRVCDRCLAEVTQRLSNAKEAANKPVSQSHEDLARKLQEELERNRRTSGSKSDGSGRRMKEVECPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1393 634 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 476 554 IPR013083 -
Mibi05g1393 634 MobiDBLite consensus disorder prediction 176 198 - -
Mibi05g1393 634 MobiDBLite consensus disorder prediction 80 110 - -
Mibi05g1393 634 SMART fyve_4 481 550 IPR000306 GO:0046872
Mibi05g1393 634 SUPERFAMILY FYVE/PHD zinc finger 484 555 IPR011011 -
Mibi05g1393 634 Coils Coil 564 584 - -
Mibi05g1393 634 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 489 549 IPR017455 -
Mibi05g1393 634 MobiDBLite consensus disorder prediction 79 211 - -
Mibi05g1393 634 FunFam Zinc finger, FYVE-type, endofin 476 554 - -
Mibi05g1393 634 Pfam FYVE zinc finger 485 549 IPR000306 GO:0046872
Mibi05g1393 634 MobiDBLite consensus disorder prediction 128 149 - -
Mibi05g1393 634 PANTHER PROTEIN FREE1 68 634 IPR045893 GO:0036258|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1393 Mibi-ChrMibi05 16579365 16585243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1393 478 562 EF-hand Containing Proteins AT3G14270 34.375 1.77e-12 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1393 05 16579365 16585243 Mibi05g1393 05 16579365 16585243 ECH