Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1376 ATGGAAGATTATGGGTGTACGCCGGACAAGGTTGCCTTCTCGATTGTCATTAGTATTTTGTGTAAGAAGAGAAGGGCAAGTGAGGCTCAGGCATTTTTTGATAGCTTGAAGCATAGATTTGAGCCTGATGTGATTGTGTATACTAATTTGGTTCGTGGTTGGTGCCGAGCTGGTAAGATTTCAGAGGTAGAGCGTGTGTTTGGGGAGATGAAGATGGCTGGAATTAAGCCTAATGTTTATACTTATAGCATTGTGATTGATTCATTATGTCGGTGTGGGCAAATTACTCGTGCTCATGATGTTCTCTCTGAGATGATTGATCTGGGTTGTGATCCAAATTCTATTACTTTTAACAATCTCATGCGTGTTCATGTTAAAGCTGGAAGGACTGAGAAGGTATTGCAAGTTTATAATCAGTTGAAGAAGGTTGGGTGTGATCCAGATACGATCACCTATAATTTCCTCATTGAGACACATTGTAAAGATGATAATCTTGAGGAAGCTATGAAGGTTCTGAATTCAATGGTGAACAAAGGGTGTGCCCCTAATGCTTCTACTTTTAATCTTATATTCAGATGCGTGGCTAAGTTGTTGAATGATGTAAATGGTGCTCATAGGTTGTATGCTAAAATGAAGGAACTCAAGTGTGAGCCTAATACTCTGACCTACAATATATTAATGGGTATGTTCACTTGTGCGAGATCTACTGATATGGTACTGAAAATGAAGAAGGAAATGGAAGAGAATGAAGTGGAGCCTAACGTGAACACTTATAGCTTGTTGATCACAATGTATTGTGGTATGGGACATTGGAAAAATGCGTACAAGTTGCTGAGAGAGATGGTTGAAGAGAAGGGCATAAAACCGAGTCAAGGGCTTTCTGAGATGGTTCTGAACGAGCTGAGGAAGGCAGGACAGTTGAAGAAGCATGAGGAGTTGGTGGATAAAATGGTTGACAGGGGATTTGTCTCTCGCTCCATATAG 984 0.4055 MEDYGCTPDKVAFSIVISILCKKRRASEAQAFFDSLKHRFEPDVIVYTNLVRGWCRAGKISEVERVFGEMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVLSEMIDLGCDPNSITFNNLMRVHVKAGRTEKVLQVYNQLKKVGCDPDTITYNFLIETHCKDDNLEEAMKVLNSMVNKGCAPNASTFNLIFRCVAKLLNDVNGAHRLYAKMKELKCEPNTLTYNILMGMFTCARSTDMVLKMKKEMEENEVEPNVNTYSLLITMYCGMGHWKNAYKLLREMVEEKGIKPSQGLSEMVLNELRKAGQLKKHEELVDKMVDRGFVSRSI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1376 327 SUPERFAMILY TPR-like 11 224 IPR011990 GO:0005515
Mibi05g1376 327 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 1 197 - -
Mibi05g1376 327 Pfam Pentatricopeptide repeat domain 202 230 IPR002885 -
Mibi05g1376 327 Pfam PPR repeat 250 282 IPR002885 -
Mibi05g1376 327 Pfam PPR repeat 5 35 IPR002885 -
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 254 289 IPR002885 -
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 78 112 IPR002885 -
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 218 IPR002885 -
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 148 182 IPR002885 -
Mibi05g1376 327 Gene3D Tetratricopeptide repeat domain 1 89 IPR011990 GO:0005515
Mibi05g1376 327 Gene3D Tetratricopeptide repeat domain 90 197 IPR011990 GO:0005515
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 43 77 IPR002885 -
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Mibi05g1376 327 Gene3D Tetratricopeptide repeat domain 198 326 IPR011990 GO:0005515
Mibi05g1376 327 Pfam PPR repeat 115 145 IPR002885 -
Mibi05g1376 327 TIGRFAM PPR: pentatricopeptide repeat domain 150 184 IPR002885 -
Mibi05g1376 327 TIGRFAM PPR: pentatricopeptide repeat domain 80 113 IPR002885 -
Mibi05g1376 327 TIGRFAM PPR: pentatricopeptide repeat domain 45 79 IPR002885 -
Mibi05g1376 327 TIGRFAM PPR: pentatricopeptide repeat domain 257 290 IPR002885 -
Mibi05g1376 327 TIGRFAM PPR: pentatricopeptide repeat domain 115 149 IPR002885 -
Mibi05g1376 327 TIGRFAM PPR: pentatricopeptide repeat domain 222 255 IPR002885 -
Mibi05g1376 327 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 113 147 IPR002885 -
Mibi05g1376 327 Pfam PPR repeat family 147 196 IPR002885 -
Mibi05g1376 327 Pfam PPR repeat family 42 91 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1376 Mibi-ChrMibi05 16363635 16364618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g1376 1 321 Miscellaneous Gene Families AT4G11690 28.261 1.63e-38 141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1376 05 16363635 16364618 Mibi05g1376 05 16363635 16364618 ECH