Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1113 ATGAGGGTCATTTCCATTTTTCTCATTCTGGTTTTGTTTTTCACCCTTTTTGTCTCTTTCTCTTATTCCGCCAATACCTCTGAGCTTTTCGAAAGCTGGTGCAAGCAGCATGGCAAAACCTACTCTTCCGAAGAGGAGAAATTACACAGGTTCAAAGTATTCAAGGACAACTATGACTTTGTTTCCAGGCACAATCAAATGGGGAATTCTGGTTATACGCTTTCCCTCAATGCCTTTGCTGATCTCACCAACCATGAATTTAAGGTTTCTCGTTTAGGTTTATCACCCACTTTCCTTCGATTTGACCACCGAACGCTTCAGCAGCCTGATGACATTCCCCTAGAGAGTCTTCCTTCTGAGGTTGATTGGAGAAAGCAAGGGGCGGTAACTCAGGTCAAAGACCAAGGAAGTTGTGGTGCTTGTTGGTCATTCTCAGCTACAGGAGCTATTGAAGGCATAAATAAGATAGTTACAGGCTCTCTCATTAGCCTCTCTGAACAGGAATTGGTGGATTGCGATAGAACCTATAACACTGGCTGCGAGGGTGGACTCATGGATTACGCTTATCAGTTTGTCATTGATAACCATGGGATTGACACAGAGGAAGATTACCCATACCAAGGTCGTGAAAGATCTTGTATCAAGGATAAGTTAAGAAGACACGTTGTTACCATTGATGGTTATACTGATGTGCCTCCAAATGACGAGAAGCAGCTAAAAAGGGCTGTTGCAACCCAGCCTATTAGTGTTGGCATATGTGGGAGTGATAGAGCTTTCCAGTTATACTCAAAGGGTATTTTCACCGGCCCATGTTCAACTTCTTTGAATCATGCGGTGTTGATTGTGGGATATGGTTCAGAAAATGGGGAGGATTATTGGATTGTGAAGAATTCATGGGGAACCAGTTGGGGAATGAACGGTTACATGCACATGCAGCGAAACACCGGCAACTCCCAAGGAATATGTGGAATCAATATGTTAGCATCATATCCAACCAAGACCAAGCCTAATCCTCCAGCTCCTCCATCCCCACCAACTCCCATCAAATGTAATATCTTCACTTATTGTGCACAAGGGGAGACCTGTTGTTGTGCAAGAAGCTTTCTCGGTATATGCTTTTCATGGAAATGTTGTGGCATATCATCTGCCGTCTGCTGCAAGGACCATCGCCATTGCTGCCCCCATGACTATCCTGTATGTGACATCAGAAGGGGTCAATGTCTTAAGAGAAATGCAAATGTGACGAGAACAAAGGCCGGCGAGATTGAGGGCCCTTTCCAGAAGCAAAAGGGTTGGAATTCTCAGTGA 1308 0.4442 MRVISIFLILVLFFTLFVSFSYSANTSELFESWCKQHGKTYSSEEEKLHRFKVFKDNYDFVSRHNQMGNSGYTLSLNAFADLTNHEFKVSRLGLSPTFLRFDHRTLQQPDDIPLESLPSEVDWRKQGAVTQVKDQGSCGACWSFSATGAIEGINKIVTGSLISLSEQELVDCDRTYNTGCEGGLMDYAYQFVIDNHGIDTEEDYPYQGRERSCIKDKLRRHVVTIDGYTDVPPNDEKQLKRAVATQPISVGICGSDRAFQLYSKGIFTGPCSTSLNHAVLIVGYGSENGEDYWIVKNSWGTSWGMNGYMHMQRNTGNSQGICGINMLASYPTKTKPNPPAPPSPPTPIKCNIFTYCAQGETCCCARSFLGICFSWKCCGISSAVCCKDHRHCCPHDYPVCDIRRGQCLKRNANVTRTKAGEIEGPFQKQKGWNSQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1113 435 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 330 - -
Mibi05g1113 435 SMART Inhibitor_I29_2 30 87 IPR013201 -
Mibi05g1113 435 CDD Peptidase_C1A 118 331 IPR039417 -
Mibi05g1113 435 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 135 146 IPR000169 -
Mibi05g1113 435 SUPERFAMILY Granulin repeat 347 380 - -
Mibi05g1113 435 FunFam cysteine protease XCP2 14 334 - -
Mibi05g1113 435 PRINTS Papain cysteine protease (C1) family signature 277 287 IPR000668 GO:0006508|GO:0008234
Mibi05g1113 435 PRINTS Papain cysteine protease (C1) family signature 135 150 IPR000668 GO:0006508|GO:0008234
Mibi05g1113 435 PRINTS Papain cysteine protease (C1) family signature 292 298 IPR000668 GO:0006508|GO:0008234
Mibi05g1113 435 FunFam Cysteine protease 1 347 410 - -
Mibi05g1113 435 Pfam Cathepsin propeptide inhibitor domain (I29) 30 87 IPR013201 -
Mibi05g1113 435 Pfam Granulin 361 408 IPR000118 -
Mibi05g1113 435 SUPERFAMILY Cysteine proteinases 23 332 IPR038765 -
Mibi05g1113 435 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 275 285 IPR025660 -
Mibi05g1113 435 SMART pept_c1 117 332 IPR000668 GO:0006508|GO:0008234
Mibi05g1113 435 SMART GRAN_2 350 407 IPR000118 -
Mibi05g1113 435 Pfam Papain family cysteine protease 117 331 IPR000668 GO:0006508|GO:0008234
Mibi05g1113 435 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 292 311 IPR025661 -
Mibi05g1113 435 Gene3D Granulin 347 420 IPR037277 -
Mibi05g1113 435 Gene3D Cysteine proteinases 18 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1113 Mibi-ChrMibi05 13504611 13507186 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1113 05 13504611 13507186 Mibi05g1113 05 13504611 13507186 ECH