Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0940 ATGGGTGCTTGGGCTATAGCCGTTCACGGTGGCGCAGGCGTCGACCCTAATCTCCCCTCCCAACGTCAACAACAGGCCAAGCAACTCCTCACCCGCTGCCTCCAACTCGGCATCTCCGCCCTCAATTCCAACCTTCCCGCCATCGACGTCGTTGAACTCGTCGTGAGAGAGCTGGAAACAGATCCTCTATTCAACTCGGGGCGTGGATCAGCGCTGACGGAAAAGGGGACGGTGGAGATGGAGGCGAGCATAATGGACGGCCCAAAAAGAAGATGCGGTGCCGTGTCGGGTGTGACGACCGTTAAGAATCCCATTTCATTGGCCAGGCTCGTCATGGACAAGTCCCCTCATTCCTACCTCGCTTTCTCCGGCGCCGAACAATTCGCCAAGAATCAGGGTGTGGAAACTGTGGACAATGAGTACTTCATCACCCTGGAAAACGTTGGAATGCTAAAGCTGGCAAAGGAAGCCAATGCTATCCTCTTTGATTATAGGGTTCCACTTGGTAAGGACACGTGTGGAGCAGTGATAGAGAGTCCACTACAAATGAATGGGCTGCCCATCAGCGTATACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACGGCGAGGGGCGGTGCGCGGCGGGGACTTCCACCGGAGGGTTGATGAACAAAATGGCCGGAAGGATCGGAGACTCGCCGTTGATCGGAGCCGGAACTTACGCGTGTGACGTGTGCGGCGTTTCGTGCACCGGCGAGGGGGAGGCTATCATACGTGGCACGCTGGCGCGTGAGGTGGCGGCGGTCATGGAGTACAAGGGAATGAGGCTTCAAGAGGCGGTTGACTTTGTCATAAAGGAAAGGTTGGATGAGGGAATGGCTGGTCTTATTGCTGTGTCTAAGACTGGTGAAGTTGCTTATGGCTTTAATTGTAATGGCATGTTTAGAGGCTGTGCTACTCAGGATGGCTTCATGGAAGTCGGAATCTGGGAATAG 978 0.5562 MGAWAIAVHGGAGVDPNLPSQRQQQAKQLLTRCLQLGISALNSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFSGAEQFAKNQGVETVDNEYFITLENVGMLKLAKEANAILFDYRVPLGKDTCGAVIESPLQMNGLPISVYAPETVGCVVVDGEGRCAAGTSTGGLMNKMAGRIGDSPLIGAGTYACDVCGVSCTGEGEAIIRGTLAREVAAVMEYKGMRLQEAVDFVIKERLDEGMAGLIAVSKTGEVAYGFNCNGMFRGCATQDGFMEVGIWE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0940 325 Pfam Asparaginase 4 324 IPR000246 GO:0016787
Mibi05g0940 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 322 IPR029055 -
Mibi05g0940 325 PANTHER L-ASPARAGINASE 4 311 IPR000246 GO:0016787
Mibi05g0940 325 Gene3D (Glycosyl)asparaginase 195 325 - -
Mibi05g0940 325 CDD Asparaginase_2 5 317 - -
Mibi05g0940 325 FunFam Isoaspartyl peptidase/L-asparaginase 195 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0940 Mibi-ChrMibi05 8793016 8794494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0940 6 259 Miscellaneous Gene Families AT4G00590 29.242 1.55e-19 86.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1697 08 33692182 33693566 Mibi05g0940 05 8793016 8794494 CCT
Mibi05g0940 05 8793016 8794494 Mibi05g0940 05 8793016 8794494 ECH