Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0932 ATGATCTCTATCACTTCCTCTGAGCTCAACTACCTCATCTTCCGCTACCTTCACGAATCAGGTTTTACGCATTCAGCATTTGCTTTTGGCTATGAGGCGGGGATTGATAAAATCAGAATTGATGGTAATTTAGTTCCACCGGGCGCTCTTCTAACATTCTTACAGAAAGGAATTCGATATATTGAGCTGGAGGCGAACTTGTGTGGTGACCTTAAGCTGATTGGTGTCTGTGTTAGGTATATCCAGAGTGATGCAGACACAGATGACGATTTATCATTTCTACAACCTCTTGACCTTATTACAAAGGATCCTAAAGAACTATACAATATGGTTAAAGCCAAAAGGGAACAGATACGTCAACACAAGTTTGAAGCAAATAAAAAGGTGAATGATTTCAGTCAACACACTGCAAGTGAACAAGTTCAGGAAATGGACAAAAAGGGCAAGGAAGGGGAAAACGAACATGAAATTGATAAAACAAGCCTAGACAAAGAAGGAGAACAAGCAAGGGATGAATATAAAAAAATACAACTTTTAGCTCAAAATGATGCGGAGAGGGATGAAGATAAGAAGATTGTAGCTGAAAATATAGAAAATGGAACGTGTGGAGGACCTGAACCAATGGAGATCTCGCAAAGCTCCACATTTTTGCCTACTGAGGTTCCTTCCAGTGAAGTAAAAATTTTGGAAGGTCATACCTCTGAGGTTTTTGCTTGTGCATGGAATCCATCTGGCTCTCTTCTTGCGTCTGGATCTGGGGATTCAACAGCTCGGATTTGGAAAATTACAGAGGGACCTCTTGACACTAGCATCCAAAATGAGCCTACAAATGTCGTGGTGCTGAGGCACTTTAAAGGAAGAACTAGTGAGAAAAGCAAGGATGTGACGACTCTTGACTGGAATGGGGATGGTACATTACTGGCAACTGGTTCTTATGATGGTCAAGCAAGAATATGGAGCAGAGATGGAGACTTGAAGAGCACATTAAACAAGCATAAAGGTCCAATCTTTTCTTTGAAATGGAATAAGAAGGGGGATTATCTTCTTAGTGGCAGCGTTGATAAAACCGCAATTGTATGGGATATAAAGACTGGGGAGTGGAAACAACAATTTGAATTTCACTCTGCGCCAACTCTTGATGTAGATTGGCGGAACAATGTTTCATTTGCAACATGTTCCACAGATAACATGATATATGTGTGCAAAATTGGAGAGAATCGACCAATCAAAACTTTCTCAGGGCATCAGGGTGAAGTTAACGCTATCAAATGGGATCCAACAGGCTCTTTTCTGGCTTCTTGCTCTGATGATCAAACTGCCAAAATTTGGAGTCTGAAGCAGGATGACTATTTACATGATTTGAAGGCACATGTTAAGGAGATATATACCATTCGGTGGAGTCCTACTGGCCCTTGTACGGGCAACCCAAACCAGGCATTAGTTCTAGCAAGTGCCTCTTTCGACTCTACAATAAAGTTGTGGGACGTGGATCAAGGGAAAGTTCTCTCCAGCTTAAATGGTCATAGGGATCCTGTATATTCCATTGCCTTCAGCCCAAATGGTGAGTATCTGGCGAGTGGCTCCATGGATAAATGCATGCATATATGGTCTGTGAAGGAGGGGAAAATTGTGAAGACATACGTTGGAAATGGTGGGATCTTTGAAGTTAGTTGGAACAAAGATGGCGATAAAGTTGCCGCTTGTTCTGCAAACAATAATGTTTGTGTCTTGGATTTCCGAATGTAG 1746 0.4152 MISITSSELNYLIFRYLHESGFTHSAFAFGYEAGIDKIRIDGNLVPPGALLTFLQKGIRYIELEANLCGDLKLIGVCVRYIQSDADTDDDLSFLQPLDLITKDPKELYNMVKAKREQIRQHKFEANKKVNDFSQHTASEQVQEMDKKGKEGENEHEIDKTSLDKEGEQARDEYKKIQLLAQNDAERDEDKKIVAENIENGTCGGPEPMEISQSSTFLPTEVPSSEVKILEGHTSEVFACAWNPSGSLLASGSGDSTARIWKITEGPLDTSIQNEPTNVVVLRHFKGRTSEKSKDVTTLDWNGDGTLLATGSYDGQARIWSRDGDLKSTLNKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDIKTGEWKQQFEFHSAPTLDVDWRNNVSFATCSTDNMIYVCKIGENRPIKTFSGHQGEVNAIKWDPTGSFLASCSDDQTAKIWSLKQDDYLHDLKAHVKEIYTIRWSPTGPCTGNPNQALVLASASFDSTIKLWDVDQGKVLSSLNGHRDPVYSIAFSPNGEYLASGSMDKCMHIWSVKEGKIVKTYVGNGGIFEVSWNKDGDKVAACSANNNVCVLDFRM 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats profile. 412 453 IPR001680 GO:0005515
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats profile. 288 320 IPR001680 GO:0005515
Mibi05g0932 581 Pfam LisH 8 33 IPR006594 GO:0005515
Mibi05g0932 581 MobiDBLite consensus disorder prediction 140 168 - -
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 412 446 - -
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats profile. 505 546 IPR001680 GO:0005515
Mibi05g0932 581 SMART Lish 5 37 IPR006594 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 541 576 IPR001680 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 407 444 IPR001680 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 500 537 IPR001680 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 225 261 IPR001680 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 281 320 IPR001680 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 326 361 IPR001680 GO:0005515
Mibi05g0932 581 Pfam WD domain, G-beta repeat 450 495 IPR001680 GO:0005515
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 288 320 - -
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats profile. 454 504 IPR001680 GO:0005515
Mibi05g0932 581 FunFam WD40 repeat-containing protein HOS15 217 581 - -
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 265 - -
Mibi05g0932 581 ProSitePatterns Trp-Asp (WD) repeats signature. 348 362 IPR019775 -
Mibi05g0932 581 ProSiteProfiles LIS1 homology (LisH) motif profile. 5 37 IPR006594 GO:0005515
Mibi05g0932 581 SUPERFAMILY WD40 repeat-like 222 579 IPR036322 GO:0005515
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats profile. 329 370 IPR001680 GO:0005515
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 329 366 - -
Mibi05g0932 581 Gene3D - 2 67 - -
Mibi05g0932 581 MobiDBLite consensus disorder prediction 131 168 - -
Mibi05g0932 581 ProSitePatterns Trp-Asp (WD) repeats signature. 482 496 IPR019775 -
Mibi05g0932 581 PANTHER WD40 REPEAT PROTEIN 4 580 IPR045183 GO:0003714|GO:0016575
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 454 500 - -
Mibi05g0932 581 CDD WD40 225 537 - -
Mibi05g0932 581 Gene3D - 218 581 IPR015943 GO:0005515
Mibi05g0932 581 PRINTS G protein beta WD-40 repeat signature 248 262 IPR020472 -
Mibi05g0932 581 PRINTS G protein beta WD-40 repeat signature 482 496 IPR020472 -
Mibi05g0932 581 PRINTS G protein beta WD-40 repeat signature 348 362 IPR020472 -
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 270 IPR001680 GO:0005515
Mibi05g0932 581 FunFam F-box-like/WD repeat-containing protein TBL1XR1 2 106 - -
Mibi05g0932 581 SMART WD40_4 222 261 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 498 537 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 540 578 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 277 320 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 364 402 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 405 444 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 447 495 IPR001680 GO:0005515
Mibi05g0932 581 SMART WD40_4 322 361 IPR001680 GO:0005515
Mibi05g0932 581 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 505 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0932 Mibi-ChrMibi05 8731297 8736618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0932 409 579 Miscellaneous Gene Families AT5G08390 29.480 5.33e-17 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0932 05 8731297 8736618 Mibi05g0932 05 8731297 8736618 ECH