Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0883 ATGGCGTCTAGGAAAGCTATAAGTGAAGAATGTCACGGCCAAGACTCTCCTTATTTTGTGGGATGGCAAGAGTACGAGAAAGATCCTTATCACCCCATTGCAAATCCTTCCGGTATCATTCAGATGGGACTCGCAGAGAATCAGCTGTCATTCGACATTGTTGAGGCATGGCTTGAGAAAAATCCCGACATATTAGGGCTCAAGAAAGATGGATTATCTATGTTCAAAGAGCTTGCTCTTTTCCAGGACTATCATGGCTACCCCTCTTTCAAACACGCACTGGTGAAGTTCATGGCAAAAATAAGAGGGAACAGAGTTAACTTTGATTCAAAAAAACTCGTCCTCACCGCTGGTGCCACTTCCGCCAATGAGATCCTCATGTTCTGCCTTGCTGATCCAGGCGAAGTTTTCCTTCTTCCCACTCCTTACTACCCTGCATTTGATAGAGATTTAAAGTGGAGGACTGGGGTTAAAATAGTTCCCATACACTGCTCAAGCTCAAATGGTTTCAGAATAACTCCTTCTGCTTTGCAACAAGCCTATGAAAGAGCCATATCGCTGAATCTAAAAGTGAAAGGGGTCTTAGTGACCAACCCCTCCAATCCTTTAGGCATAAGCTTAAGCAAAACAGAGCTGAACCTTCTCCTAGATTTCGCCATTGACAAGAAAGTTCATATCATAAGTGACGAAATTTATTCAGGCACAGTCTTTGACTCACCCACATTCATAAGCATCATGGAAGTAGCAAAGGAAAAGAACATAGAGGAGGAGGAGGAAGCAAGGCTTTGGAGTAGAATTCACATTGTTTATAGCCTTTCAAAGGATCTTGGCTTACCTGGATTTCGAGTTGGCATGATATACTCAAATAACCAAGTGGTGGTGGAAGCAGCCACAAAAATGTCAAGCTTTGGGCTAGTTTCGTCTCAAACTCAGTATTTGCTGGCGAATTTGCTCTCTGATGATGATTTCACTGAGGAATATATGAAGGAGACACAGAGGAGGCTGAAGAAGAGAAGGGAAATGTTGGTATCTGGTCTGAGAAAAGCAGGGGTGAGGTGTCTGAAGAGTAATGCAGGGCTGTTTTGCTGGGTGGACATGAGAAATTTGTTGAGTTCAGATAGTTTTGAAGCAGAGAAGGAGCTTTGGAAGAAGATTCTTAAGGTGGTTGGTCTGAATATTTCTCCCGGTTCATCATGTCATTGCTCTGAACCGGGTTGGTTCAGGGTTTGCTTTGCTGATATGTCGGAGAACACATTACAAGTTGCAATGCAACGATTGAAGGTGTTTGCTGACTCAACCGCTGCATCAGAGAGGTCAGAACTTTGCCGCCGGTGGGTTTCCCAGTTATCTTCATCTTGTGACTGGGAAGCTGGCATTTATTTCTGA 1386 0.438 MASRKAISEECHGQDSPYFVGWQEYEKDPYHPIANPSGIIQMGLAENQLSFDIVEAWLEKNPDILGLKKDGLSMFKELALFQDYHGYPSFKHALVKFMAKIRGNRVNFDSKKLVLTAGATSANEILMFCLADPGEVFLLPTPYYPAFDRDLKWRTGVKIVPIHCSSSNGFRITPSALQQAYERAISLNLKVKGVLVTNPSNPLGISLSKTELNLLLDFAIDKKVHIISDEIYSGTVFDSPTFISIMEVAKEKNIEEEEEARLWSRIHIVYSLSKDLGLPGFRVGMIYSNNQVVVEAATKMSSFGLVSSQTQYLLANLLSDDDFTEEYMKETQRRLKKRREMLVSGLRKAGVRCLKSNAGLFCWVDMRNLLSSDSFEAEKELWKKILKVVGLNISPGSSCHCSEPGWFRVCFADMSENTLQVAMQRLKVFADSTAASERSELCRRWVSQLSSSCDWEAGIYF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0883 461 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 271 284 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mibi05g0883 461 SUPERFAMILY PLP-dependent transferases 13 429 IPR015424 -
Mibi05g0883 461 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 293 425 - -
Mibi05g0883 461 Pfam Aminotransferase class I and II 40 426 IPR004839 GO:0009058|GO:0030170
Mibi05g0883 461 Gene3D Aspartate Aminotransferase, domain 1 28 425 IPR015422 GO:0003824
Mibi05g0883 461 FunFam 1-aminocyclopropane-1-carboxylate synthase 3 62 320 - -
Mibi05g0883 461 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 5 427 - -
Mibi05g0883 461 CDD AAT_like 81 427 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 42 68 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 188 212 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 320 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 112 132 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 134 155 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 289 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 75 91 - -
Mibi05g0883 461 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 224 247 - -
Mibi05g0883 461 Gene3D - 62 320 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0883 Mibi-ChrMibi05 8223265 8225867 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0883 05 8223265 8225867 Mibi05g0883 05 8223265 8225867 ECH