Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0870 ATGAAAACCATATGGTTTCTTCCACTCAATCCTGCAAGAACCCTAATGGCCGACGATGCACAATATTCATCGGGCACTGATTCCACTTCTCACAAGCGCAAGTACGAGGAGCCTTCAACTCACAGGTCCACTGGCTTCTCTGCGCCTATCATTTCTACATCTCCCGATGGTTCTCACGCTTCTCTTCCTTCCTATAACAACGTACCACCACCGGCGGCAACTGGCATCGAACTCGCCAAGCAGCGAGCTCAGGAGGTTGCCGCTCGCCTCTTAAACAGCAGTGGAGCTACTGGTTTGGATGCCAAGCGTTCTAAGGTTGAGAATGGTTCTTCAGGATTTGACCCCATCGATTCCAAGCCTCAGTACTCGGTTCCTTCAGGTGCTCCCATTTCTTATGCCTATCAGGGTTCTAGTAAAAAGATAGAGATTCCGAATGGAAGGGTCGGCGTTATTATTGGTAAAGGTGGGGAGACGATCAAGTATCTTCAAACGCAGTCTGGAGCGAAGATCCAGGTTACACGTGATATGGATGCGGACCCTAATTCTCAAACAAGGATGGTGGAACTTATGGGCACTCCCGATCAAATTGCTACTGCTGAGAAATTGATTAACGAAGTCCTTTCTGAGGCTGAATCTGGAGGTTCTGGTATTGTTGCAAGGCGATTGACTGGACAAGCTGGGTCTGACCAATTTGTGATGAAAATTCCAAATAATAAAGTTGGACTTGTGATTGGAAAAGGAGGAGAAACAATAAAGAATATGCAAGCTCAGACTGGAGCAAGAATTCAGGTGATTCCATTGCATCTTCCCCCAGGTGACACATCGACAGAAAGAACGTTACAAATTGATGGAACCAGTGAACAAATTGAGTCTGCAAAACAGTTGGTTAATCATGTCATTAGTGAGAATCGTCTTAGAAATCCATCTATGTCTGGTGGTTATAGTCAACAAGGTTACCAAGCCCGACCACCTACTAGCTGGGGTCCTCCTGGTGCTCCTATGCAACAACCTGGTTACGGCTATGTGCAGCCTGGAGCATACTCTGGTCCATCACCCCAATATAACATGCCTCAGCCACCATATCCAGGATATCCTAACCAGTCATCTGGTGGATATTCCTCCAATTGGGATCAGTCCTCTGTGCCACCTCAACAGTCAACCCAGGGTGGTGGTTATGATTACTATGGTCAACAGCAACAGCAAAGTGCTGGGGGTCCTCCGACTGCAGCTGATGGGTCTGCTTATAATTATGGCCAGCCACCTGCCTCTGGTTATAACCATCCTGGCCAGGGTTATCCTCAGGACAGCTATGGAGGGTATAGCGCACCACCTCAAACAGGATATGGGCAGCCACCTACATATGATCAGCAGCAAGGCTATGGTTCAGCCTCCAGTTATGGTAGTGGCAACAACCCAACACAGGAGGGCCACACTACTAGCTATGGGGCTCAAGGGGACTCAACCCAGCCTCCTCCAGCTCAAGGAACTGGACAGCAAGGATATGGTTCCAACCAGCAGCCGAGCCCAAACCCAGCTACCTATCCAGCTCAAGGAACTGGGCAGCCGGGTTATGGGATGCCTCCAGCTTCTCAAGCACCATATGGCAGTCAACCCCAAGCACAGTCTGCTTATGGAGCTGGTTACGGGGCTCCACCACCTCAAAAGCCTAGTGGAACTCCTGTTTATGGGCAGTCCACACAATCACCTAGCGCAGCTGGAGGCTATGGTCAATCTGGCGCAGTGCAACCAGGGTATCCTCCTGCTCAGCACGCTTCTGGCTATGCCCAATCGGAATCTGGTGCACAAAGAGCCCCACCACCATATGGTTCTGCAGCGCAACCTGGTTATGGTGCCCCGCCTGGTGGTCAGCCTGGTTATGGTCAGGCACCTCCATCGTACAACAGTGGTTCTTACGGTGCTGGTTACACTCAGCCTCCAGCATATTCTGCTGATGGTACACCGGCACAGGCTGCCCCACAAGGTGGTGTCGCTAAAGCATCGCCTCAAAGTTGA 2013 0.5047 MKTIWFLPLNPARTLMADDAQYSSGTDSTSHKRKYEEPSTHRSTGFSAPIISTSPDGSHASLPSYNNVPPPAATGIELAKQRAQEVAARLLNSSGATGLDAKRSKVENGSSGFDPIDSKPQYSVPSGAPISYAYQGSSKKIEIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDADPNSQTRMVELMGTPDQIATAEKLINEVLSEAESGGSGIVARRLTGQAGSDQFVMKIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQIDGTSEQIESAKQLVNHVISENRLRNPSMSGGYSQQGYQARPPTSWGPPGAPMQQPGYGYVQPGAYSGPSPQYNMPQPPYPGYPNQSSGGYSSNWDQSSVPPQQSTQGGGYDYYGQQQQQSAGGPPTAADGSAYNYGQPPASGYNHPGQGYPQDSYGGYSAPPQTGYGQPPTYDQQQGYGSASSYGSGNNPTQEGHTTSYGAQGDSTQPPPAQGTGQQGYGSNQQPSPNPATYPAQGTGQPGYGMPPASQAPYGSQPQAQSAYGAGYGAPPPQKPSGTPVYGQSTQSPSAAGGYGQSGAVQPGYPPAQHASGYAQSESGAQRAPPPYGSAAQPGYGAPPGGQPGYGQAPPSYNSGSYGAGYTQPPAYSADGTPAQAAPQGGVAKASPQS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0870 670 MobiDBLite consensus disorder prediction 41 68 - -
Mibi05g0870 670 ProSiteProfiles Type-1 KH domain profile. 228 296 - -
Mibi05g0870 670 MobiDBLite consensus disorder prediction 365 407 - -
Mibi05g0870 670 SMART kh_6 227 301 IPR004087 GO:0003676
Mibi05g0870 670 SMART kh_6 135 208 IPR004087 GO:0003676
Mibi05g0870 670 MobiDBLite consensus disorder prediction 439 517 - -
Mibi05g0870 670 CDD KH-I 138 203 - -
Mibi05g0870 670 MobiDBLite consensus disorder prediction 97 122 - -
Mibi05g0870 670 ProSiteProfiles Type-1 KH domain profile. 136 203 - -
Mibi05g0870 670 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 135 213 IPR036612 GO:0003723
Mibi05g0870 670 CDD KH-I 231 296 - -
Mibi05g0870 670 FunFam KH domain-containing protein 223 323 - -
Mibi05g0870 670 Gene3D K Homology domain, type 1 224 325 IPR036612 GO:0003723
Mibi05g0870 670 Gene3D K Homology domain, type 1 132 223 IPR036612 GO:0003723
Mibi05g0870 670 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 228 306 IPR036612 GO:0003723
Mibi05g0870 670 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 126 487 - -
Mibi05g0870 670 MobiDBLite consensus disorder prediction 18 68 - -
Mibi05g0870 670 Pfam KH domain 232 297 IPR004088 GO:0003723
Mibi05g0870 670 Pfam KH domain 139 205 IPR004088 GO:0003723
Mibi05g0870 670 MobiDBLite consensus disorder prediction 559 575 - -
Mibi05g0870 670 MobiDBLite consensus disorder prediction 303 670 - -
Mibi05g0870 670 MobiDBLite consensus disorder prediction 303 323 - -
Mibi05g0870 670 MobiDBLite consensus disorder prediction 628 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0870 Mibi-ChrMibi05 8111115 8117966 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0870 05 8111115 8117966 Mibi05g0870 05 8111115 8117966 ECH