Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0779 ATGCTTCCCAATCCCTCAACATCATCAGCGATCATCATGGTTACTTACTTCACCCATCATCTTCAAGTCACAGTACAAATCTCTATTCCACATCAAAAGAAGAACAACAAACACTGTTTGTGGCTGATGCTTCGCACAGTATTAAGATTTAAGACCCGTGACAAAATGAGGCATTTTCCCAAACAAACATTCATATTTCTAGCTTTCTTCATCTTCTTCACCCATTTTTTCCACTTTAGTGCATCCGAAGTTTCCCGCCGTCCCTGCAAAGCATGGCTCGTGCAATCCATTCCCACCGATATGCCCAATCTTTCCCGCGTTCCCGGCGTTCTATCTACTGGGGATGTGCTCCGGTGGCTCGCGTCGAACTCTACTCGGAGACTCGACATAATTGCTCAGTACTGGCAGCTAGTAGCATCTCCACATGATCCTCGTTCTGGAGATTATGGCTACTCCGAAAGTGATATGCGTAAATTTGGTGCAGATGAAGGCACTGCTGTTTATGAAGCCATAGATGCTGCTGCTGATCGTAATGTTAGAATCAGGTTACTGTCTCACTCTGGAGTATATCCTGACTTCACTGCGGAACCATCTAAACTTGCTTCAGGAAGGCCAAATGTTAAGAATGTGATCTTGTTACTGGAAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAACCAGGACGTATATATTGGATCAGCAAACAATGACTGGAAGTCTCTTACTCAGGTTAAGGAAGTTGGAATCTATCTTACTGGTTGCCCAAGAATAGCAGAAGGGATTGAAGTCTACTTCGACAATTTATGGAGACTCGCGTCTCTTAATCCTTCGGCTCAGACAAAAACTGTATTTGATCAACAGTGGCAAGTTGAAAGGAAGGTTCCTTGCTGGTCTCATTTCATTGACCAAAAACAGAGATGCGAGTCTCCTCTTCCTCAGTATGTAAAGACTCCCCATGTTGCAGGATATCCTGTTCTTTCTGATCCCAAGATGCTTGAAGTTTCAATTGAGACTCCTGGAAGCAACCGCTCAACACAGCTTCCCCAAACTAGCTACCTCTCCTTTGCCCCTCCTGAGCTGTCATTTGGCAAGTATCAGGCTGATGAACAGGCTTGGGTTGACACAATTAAATCTGTTGGAATGAAGGAGACAGTTAGAATCAACACCATGGACTGGTTGGGTCAGTCACAATATACTGACCAAACTGTTTACTGGTCATCCCTCTCCTCTGCGATATCAGAGGTTGTATTTTCCAAGCATGCAACAGTAAAAATATTGGTGGCATATTGGAGTCACTTCATCAATGGCACAGATGTGTACCTGAAGTCTCTCCTCTACTCCAACAATCTCTGTTCATCTTCAAAGTACAACAAGTGCTCTGGAAAAGTTGAGATCAAGTATTATATGGTTCCAGGTTTCAATTCGACAGGGCCTGCCATTAATGGCGGAGCCAGTACAGGAAATACGTACCCTGGTTTTACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGTAAGGGCTCACATTGGAACCAGCAATCTCATATGGGACTACTTTTATACCACCTCAGGGGTCAGCTTTGGAACACACAACCCTGCCATTGTTTCACAACTACAGGAGATTTTTGACGCTGACTGGCATTCACCATATTCTGTACCAGTTGAAAAACTGGAACAATGCCTTTCTTCTTCATTCTAG 1719 0.441 MLPNPSTSSAIIMVTYFTHHLQVTVQISIPHQKKNNKHCLWLMLRTVLRFKTRDKMRHFPKQTFIFLAFFIFFTHFFHFSASEVSRRPCKAWLVQSIPTDMPNLSRVPGVLSTGDVLRWLASNSTRRLDIIAQYWQLVASPHDPRSGDYGYSESDMRKFGADEGTAVYEAIDAAADRNVRIRLLSHSGVYPDFTAEPSKLASGRPNVKNVILLLEDWWGSGIVHAKVWISDNQDVYIGSANNDWKSLTQVKEVGIYLTGCPRIAEGIEVYFDNLWRLASLNPSAQTKTVFDQQWQVERKVPCWSHFIDQKQRCESPLPQYVKTPHVAGYPVLSDPKMLEVSIETPGSNRSTQLPQTSYLSFAPPELSFGKYQADEQAWVDTIKSVGMKETVRINTMDWLGQSQYTDQTVYWSSLSSAISEVVFSKHATVKILVAYWSHFINGTDVYLKSLLYSNNLCSSSKYNKCSGKVEIKYYMVPGFNSTGPAINGGASTGNTYPGFTRVNHGKYAVSDVRAHIGTSNLIWDYFYTTSGVSFGTHNPAIVSQLQEIFDADWHSPYSVPVEKLEQCLSSSF 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0779 572 Gene3D Endonuclease Chain A 352 555 - -
Mibi05g0779 572 CDD PLDc_vPLD3_4_5_like_1 93 260 - -
Mibi05g0779 572 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 219 246 IPR001736 GO:0003824
Mibi05g0779 572 SMART pld_4 219 246 IPR001736 GO:0003824
Mibi05g0779 572 SMART pld_4 499 525 IPR001736 GO:0003824
Mibi05g0779 572 Gene3D Endonuclease Chain A 112 279 - -
Mibi05g0779 572 SUPERFAMILY Phospholipase D/nuclease 361 565 - -
Mibi05g0779 572 CDD PLDc_vPLD3_4_5_like_2 358 554 - -
Mibi05g0779 572 PANTHER PHOSPHOLIPASE D - RELATED 30 566 - -
Mibi05g0779 572 SUPERFAMILY Phospholipase D/nuclease 117 277 - -
Mibi05g0779 572 Pfam PLD-like domain 165 275 IPR025202 -
Mibi05g0779 572 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 499 525 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0779 Mibi-ChrMibi05 7302619 7311460 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0779 05 7302619 7311460 Mibi05g0779 05 7302619 7311460 ECH