Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0743 ATGGACATCCTCAGCCTCAAACCAGTTGGCATGATCATGGGCATTGTCCTTGGAATCTCTCTGATCTTTGCTTTCTCTCGTTTCCAAAGTTACCGATCAAAACGTCGTTCCGATTTGGCGGAGGCCATAGCAGCTTTGGCCAGGATGAAGACAATGGAAGATTCTAGAAGAATTATCCCACCTGAATCATGTCCCCCCTGGGTAGTTTTCACTCGAAGACAGAGGTTAAATTGGCTCAATACCCATCTCCGGAAAATCTGGCCTTATGTTAATGAGGCAGCATCAGAGTTGATAAGAAGCAATGTGGAGCCCACTCTTGAGAATTACACTCCCAAAATCTTGTCTTCAATCACCTTCTCTAAGTTGACTCTTGGTACTGTGGCACCTCAATTCACAGGAGTGGCCATTGTTGAAGAAGAAAGTGGGGCTGATGGAGTGACTATGGAATTAGAGATGCAGTGGGATGGTAACCCCACTATTGCATTTGATGTTAAAACTCGAGTTGGCGTTGTAATACCTGTTAAGGTAAAAGATATTGGATTCACAGGCGTTTTCAGGCTGATTTTCAAGCCTTTAGTAGATGAGTTCCCTTCTTTTGGAGCTGTTTCTTATTCCTTGAGAGAAAAGAAACATCTGGACTTTACTCTTAAGATTTCTGGAGGTGATGTTTCCACTCTCCCAGGCATATATGATGCCATAGAGGAAACAATTCGAGATGCTATTGAGGGTTCTATAACCTGGCCAGTTCGCAAAATTATACCAATTATCCCAGGCGATTACAGCTTCCTAGAGTTAAAACCAGTTGGAACACTAGAAGTAAAACTAGTCCAAGCAAAAGACTTGGCAAATAAAGATCTGATTGGAAAATCCGATCCTTTTGCTGTTTTATTCGTACGCCCACTTCGTGACAGAGTCCAAACCAGCAAAACAATCAACAACGAGTTGAATCCAGTATGGAACGAGAACTTCGAGTTCACCGTGGAAGATGCATCAACTCAGCACTTGACTGTAAGAATATTTGATGATGAGGGTATTGGGGCTGATCAGCTCATTGGTTGTGCCCAGGTGCCATTGAAGGACCTTCAAACTGGAAAAGTTCAGACTTTATGGTTGAAACTGGTCAAGGATTTGGAGGTCCAAAGAGATAAAAAATACAGGGGTGAGGTGCACTTGGAGTTATTGTACTGTCCATTTGGTGTTGAAAGCAACTTTACAAATCTGTTTAGTGGTAGTTTCGGGCTGACCACTTTCGAGAAGACTATTAAGAGAGAATCTGATGAGAAAGAGAGTGGAGATGTTAACAAATCACAGAGGAAACGTGTGATAGTAAGAGGAGTACTATCTGTGACAGTTATATCAGCTGAAGACTTACCAGCAGATAAGGACTTACTTGGCAAAATCAACGCTTATGTTGTGCTCATGTTGAAGAAAGCAGACCAAATACTCAGAACCAGGGTTGCAACTTCAGGACTAAACCCTGTTTGGAATCAAACATTTGACTTCGTTGTGGAAGATGCATTGCATGAGATGCTATTTCTTGAAGTATGGGATCAAAACCTCATTGGGCAGGACAAAATTGGAAGAGTGACGATGACACTGACTAGGGTCATCCTTGAAAAGGAAGTTCAGGATAGTTTTGCGTTAGATGGAGCTAAATCTGGAAAACTTAACCTTCATCTTAGCTGGACTCCACAACCCATTTATCGAGATCCTTGA 1716 0.4225 MDILSLKPVGMIMGIVLGISLIFAFSRFQSYRSKRRSDLAEAIAALARMKTMEDSRRIIPPESCPPWVVFTRRQRLNWLNTHLRKIWPYVNEAASELIRSNVEPTLENYTPKILSSITFSKLTLGTVAPQFTGVAIVEEESGADGVTMELEMQWDGNPTIAFDVKTRVGVVIPVKVKDIGFTGVFRLIFKPLVDEFPSFGAVSYSLREKKHLDFTLKISGGDVSTLPGIYDAIEETIRDAIEGSITWPVRKIIPIIPGDYSFLELKPVGTLEVKLVQAKDLANKDLIGKSDPFAVLFVRPLRDRVQTSKTINNELNPVWNENFEFTVEDASTQHLTVRIFDDEGIGADQLIGCAQVPLKDLQTGKVQTLWLKLVKDLEVQRDKKYRGEVHLELLYCPFGVESNFTNLFSGSFGLTTFEKTIKRESDEKESGDVNKSQRKRVIVRGVLSVTVISAEDLPADKDLLGKINAYVVLMLKKADQILRTRVATSGLNPVWNQTFDFVVEDALHEMLFLEVWDQNLIGQDKIGRVTMTLTRVILEKEVQDSFALDGAKSGKLNLHLSWTPQPIYRDP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0743 571 CDD C2 447 544 - -
Mibi05g0743 571 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 74 255 IPR039010 -
Mibi05g0743 571 FunFam Extended synaptotagmin-2 424 566 - -
Mibi05g0743 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 267 398 IPR035892 -
Mibi05g0743 571 Pfam C2 domain 269 373 IPR000008 -
Mibi05g0743 571 Pfam C2 domain 445 544 IPR000008 -
Mibi05g0743 571 SMART C2_3c 446 545 IPR000008 -
Mibi05g0743 571 SMART C2_3c 270 370 IPR000008 -
Mibi05g0743 571 ProSiteProfiles C2 domain profile. 250 371 IPR000008 -
Mibi05g0743 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 444 564 IPR035892 -
Mibi05g0743 571 Gene3D C2 domain 428 564 IPR035892 -
Mibi05g0743 571 Gene3D C2 domain 263 397 IPR035892 -
Mibi05g0743 571 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 9 562 IPR045050 GO:0008289
Mibi05g0743 571 CDD C2 271 373 - -
Mibi05g0743 571 ProSiteProfiles C2 domain profile. 427 546 IPR000008 -
Mibi05g0743 571 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 72 256 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0743 Mibi-ChrMibi05 6993178 6997431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0743 271 533 Lipid Metabolism Gene Families AT1G51570 27.007 5.18e-16 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0743 05 6993178 6997431 Mibi05g0743 05 6993178 6997431 ECH