Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0592 ATGGTGAATTCTATGGTAGAACGAGCTACGAGCGACATGCTCATTGGTCCTGATTGGGCAATGAATATCGAGATCTGTGACATGCTGAATAGCGACCCCGGGCAAGCAAAGGACGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCTCTAACCCTACTGGAGACAATCATAAAGAACTGTGGGGATATTGTTCACATGCATGTCGCAGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGCAAAGAAGAAGCCTGATTTTCATGTCAGAGAGAAGATTCTAATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGACCAAGGGCTAGATACCCGCAATATTATGCTGCATACCAGGAACTGTTGCGTGCAGGGGCAGTATTCCCTAAGAGGTCTGAACAATCTGCACCTGTGTTCACACCTCCACAAACACAACCATTGTCATCATATCCTCAAAATTTACGCAACTCAGAGGCTCATCAGGATGCGGCTGAGTCCTCTGCAGACCCTGAGTTCCCAACTCTCAGTATGACCGAAATTCAGAATGCCCGTGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCAATAGAACCAAGTAACAAAGAAGGTCTTAGACAGGAGGTAATTGTTGATTTGGTGGAGCAGTGTCGAACTTACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCGGATGAGTCACTGCTATGCGAAGGTCTAGCCCTCAATGACGATCTGCAGCGAGTACTAGCAAAGCATGAAGCCATTGCCTCAGGTGTTCCTGTAGCAAATCAAACAGACAAAGTGAAGTCCGAGCCTCTTGGAGCACTTGTAGATGTTGGTCCTTTGGTTGATAATGGAGATGCTAGCAAGCAAACTGATGGGAGTTCTAGTGCTCAAGGTGGGTCCCAAACGTTAAACCAATTGTTGCTTCCTGCTCCTCCCACTTCTAATGGTTCAGCTTTTAATGCTAAGGCTGATCCCAAAATGGACTTGCTCAGTGGTGATGATTATGCCTCACCAAAAGCAGAGTCTTCTCTTGCTCTTGTTTCTGTGGGAGAACAGCAACCAGCAAATCCCGTGTCCCAGCAAAATGCCCTTGTTCTTTTTGATATGTTTTCAAATGGTAACAGTGAAGTGACTTCCACACAGCTGACCCAGCCAACTAATGTTGGGGGTCAAACCAGTCCATTAGCCCCCCACGGTCAGCAACAGCAGATGGTCATGCCTACACAAGGTGCGCTTTATGCCAATGGAAGCATGCCTAATATGGGGTCACCTCCTTTTGAGCAATCACTTTACCCACAAAGTGGAGGTCCTTCCTGGAATGGTCAAGTTGCCCAGCAGCAGCAGCAACAGTCATCAGCTTCACCAGTTTATGGTGCACAAAGCAGTGAATCACTGCCACCACCTCCGTGGGAAGCTCAACCAACAGACAATGGTAATCCAGTAGCAGGCAGCAATTATCATCCATCAATGCAAGTCACTCAAGGGGTTATGACACACGTTCCGAGTGGTGCACATACTCAGGGAATTCCGGCATTGGGAAATGACCAAGTTGTTGGCATGTATATGCAGCCGAATGTTAACAACATCCCTGTGTCTCCAATGAACAGCCATGTTGTTCACAGCAATCCAATGGGCTTGCAACACCCTCAGTATTTTCAGGGTGGCGCAGGACCTTATATGGGTATGGCTTCTCCATTGCAAGCTGCTCCTATGTATCCTCAGCAGATGTATGGCAACCAATTCCCGGGATATGGCTACGGTCAGCCACAATACCTGGAGCAGCAAATGTATGGCCTATCTGTTAGAGACGATAATGGTTTGAGAAACCCCTACCAGGTTTCTTCCTCATCTTATGCGCCACTTAGTAAACCTTCCAAACCAGAGGACAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTCAAATCAAAACCCACTCCAGGTCGAGCTGGTAGCTTGTAA 2001 0.4643 MVNSMVERATSDMLIGPDWAMNIEICDMLNSDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIAKKKPDFHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPKRSEQSAPVFTPPQTQPLSSYPQNLRNSEAHQDAAESSADPEFPTLSMTEIQNARGIMDVLAEMLSAIEPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCEGLALNDDLQRVLAKHEAIASGVPVANQTDKVKSEPLGALVDVGPLVDNGDASKQTDGSSSAQGGSQTLNQLLLPAPPTSNGSAFNAKADPKMDLLSGDDYASPKAESSLALVSVGEQQPANPVSQQNALVLFDMFSNGNSEVTSTQLTQPTNVGGQTSPLAPHGQQQQMVMPTQGALYANGSMPNMGSPPFEQSLYPQSGGPSWNGQVAQQQQQQSSASPVYGAQSSESLPPPPWEAQPTDNGNPVAGSNYHPSMQVTQGVMTHVPSGAHTQGIPALGNDQVVGMYMQPNVNNIPVSPMNSHVVHSNPMGLQHPQYFQGGAGPYMGMASPLQAAPMYPQQMYGNQFPGYGYGQPQYLEQQMYGLSVRDDNGLRNPYQVSSSSYAPLSKPSKPEDKLFGDLVDMAKVKSKPTPGRAGSL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0592 666 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Mibi05g0592 666 FunFam TOM1-like protein 2 182 272 - -
Mibi05g0592 666 MobiDBLite consensus disorder prediction 299 333 - -
Mibi05g0592 666 CDD VHS 2 132 - -
Mibi05g0592 666 CDD GAT_GGA_like_plant 188 266 - -
Mibi05g0592 666 MobiDBLite consensus disorder prediction 145 172 - -
Mibi05g0592 666 FunFam TOM1-like protein 2 1 148 - -
Mibi05g0592 666 MobiDBLite consensus disorder prediction 142 179 - -
Mibi05g0592 666 Gene3D - 1 135 IPR008942 -
Mibi05g0592 666 Gene3D - 183 272 IPR038425 -
Mibi05g0592 666 PANTHER TOM1-LIKE PROTEIN 1 657 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mibi05g0592 666 MobiDBLite consensus disorder prediction 425 501 - -
Mibi05g0592 666 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Mibi05g0592 666 MobiDBLite consensus disorder prediction 621 635 - -
Mibi05g0592 666 MobiDBLite consensus disorder prediction 425 474 - -
Mibi05g0592 666 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Mibi05g0592 666 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Mibi05g0592 666 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Mibi05g0592 666 MobiDBLite consensus disorder prediction 389 413 - -
Mibi05g0592 666 MobiDBLite consensus disorder prediction 291 338 - -
Mibi05g0592 666 MobiDBLite consensus disorder prediction 621 643 - -
Mibi05g0592 666 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Mibi05g0592 666 SUPERFAMILY GAT-like domain 139 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0592 Mibi-ChrMibi05 5730495 5736709 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0592 05 5730495 5736709 Mibi05g0592 05 5730495 5736709 ECH