Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0590 ATGGAGGGGGACGGGGGCGATGAAGCCAATACCGATCGGCGTTTGAAAAGTATTGAAGAAGTCAGAAGTTCTTTTGAGACATCACGGGCAAGGTTATTCAAGGAATATAAAGAGGTTCAACGGGAGAAAACAGCCGACCCAGATATTCAACTCGTCTGTGATGATTCTAACATTTTCAAATGGACAGCCCTTATCAAGGGACCATCAGAGACTCCATATGAGGGGGGTGTTTTCCAGCTTGCTTTTGCTGTTCCGGAGCAGTATCCTCTACAACCTCCTCAAGTGCGGTTTTTGACTAAAATATTTCACCCAAATGTACATTTTAAGACGGGGGAAATTTGTCTGGATATCTTGAAAACTGCTTGGAGCCCAGCTTGGACACTTCAATCTGTCTGTAGGGCTATAATAGCTCTGATGGCCAATCCAGAACCTGACAGTCCATTGAATTGTGATTCAGGTAATCTTCTTCGTTCAGGCGATGATAGAGGGCACCAATCCATGGCCAGAATGTACACTAGACTGGCAGCAATGCCAAAGAAAGGCTGA 546 0.4524 MEGDGGDEANTDRRLKSIEEVRSSFETSRARLFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMANPEPDSPLNCDSGNLLRSGDDRGHQSMARMYTRLAAMPKKG 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0590 181 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 102 118 IPR023313 -
Mibi05g0590 181 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 28 158 - -
Mibi05g0590 181 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 27 177 IPR000608 -
Mibi05g0590 181 SMART ubc_7 30 177 - -
Mibi05g0590 181 SUPERFAMILY UBC-like 16 177 IPR016135 -
Mibi05g0590 181 Gene3D Ubiquitin Conjugating Enzyme 24 176 IPR016135 -
Mibi05g0590 181 FunFam protein PEROXIN-4 isoform X1 25 176 - -
Mibi05g0590 181 CDD UBCc 31 172 IPR000608 -
Mibi05g0590 181 Pfam Ubiquitin-conjugating enzyme 31 170 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0590 Mibi-ChrMibi05 5713896 5718708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0590 31 162 Miscellaneous Gene Families AT3G17000 34.783 1.81e-16 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0590 05 5713896 5718708 Mibi05g0590 05 5713896 5718708 ECH