Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi05g0568 | ATGGAGGAAGCTGCGAATTTTCCCAACTCCGGCAATTCATCTCGTAAAGTAGTCGCCGTAGCTGCCGGCGAAGCACATACTCTAGCTCTAACAGGGGACGGGTGTGTATATTCTTGGGGAAGAGGAATATTGGGGCGACTTGGACGAGGATCAGAAGAGGACGAGCTATTTCCAGTTCAGGTCAAGTTTGAGAACCTCAATTCATCAGGAGACACTATCAGAATTGTGGGAATCGCTGCCGGTGCCTATCATAGTCTTGCTCTTGCAGATGATGGATCAGTCTGGTGCTGGGGTTACAATATCTGTATCCTTAACATAATTGTAGTGCCTTGTGAAAGTCAGATACAAAAAAATACCAGTTTCTACTTCTATTGTGCTTTTCTTGAGTTGCATCCTCCTGATTCTTCAGCAGACACTCCAGAAGAAGGAAGTAAAGCATTACTAAAGATATGTTCTGTCAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAACCTAGGGGCCCTATGGATGTGGGGAAACTGCCCACAGAAAAGCAAAGAAGGAGGGTTCTCTCTTGTGAGCAGTTTCATTCCCACACCAGTATGGGATTTTCATGGCCATACCGTTGTCAAGATTGCGTGCGGAAATGAGCATGTTGTGGCGCTAGTTACTGCTGGAGAATCGTACGTTGGTGAAGACCTTGTGTGCTACTCTTGGGGTAATAACAGCCATGGCCAATTAGGCTTGGGGGATAGAGAGAGCAGGCCACAACCAGAAGTTTTAATTGCATTTGACCAAGAGTCCCCATGGGCAATTTATGAGGTAGCTTGTGGTGCCTTTCACACCGCTTTGCTAACTCACAAAAAGAGCCCTAGAGACACATCAGCAAGCATGTGCTGGACGTTTGGCCTTGGGGATAATGGGCAACTTGGGCATGGAACCACACAAAGTGAATTGCTTCCTATGCTGGTCAAAGAATTGCCACAACATGTACGTCTAATTTCTGTTGACTGTGGCTTGTTTCATACCAGTGTTGTTTCATCAGCTGGGGATGTGTGGTCATGGGGGATGGAGAAGGGTCTTGGTCTGTGCCCTGATGCCAGTTTTACTGGAACTGATCCTGGGGATGCACTCTCTCCCCTTCTTATCTCATGTTCGCCACATCAGCCGAGGTTTCCGGGGCCGGTCCAAGTTGCCTGTGGAGCCGCTCATACTGTTGTTGTTGCAGAGGAGGGATATAAGCTATGGTCTTGGGGTAGGGGAAGGAGTGGGGTTTTGGGCAATGGTAAGGCTGTGGATTTTTACAATCCCACACTAGTTTTATGGCCTCCACTGATAGAGGATTTCAATCAAGAGGAGGTGAAGAGTACTGAAACAGTCGCAGAAATGGATGAGAAATTAGCATCAGCATTGAATGAACTGAAGCTGCTTCAGACAAGGTTTTCTGCGATGGAGAGATATGCCAGTATACTTCATGGTTCAATATTTGGGAAACCTTTTGATGAGAGTGATATCCCAGTGTCATTGAAGAACTCAGGTGTATTCGACATTGCAAAGGAATGGGAGGGCATGCTAGAGGAAGCAGATCGTAGCAAGCTAATTAGGTTGGAAATGTTCTACAGAAACATGATTGCCGGTGTGAAAGATAAACTCATGAAGAAAAGGATCAAGGAGCTTATAAAGGAATGCCTCCAATCTTCAGAATTTGCAAAATAG | 1698 | 0.4605 | MEEAANFPNSGNSSRKVVAVAAGEAHTLALTGDGCVYSWGRGILGRLGRGSEEDELFPVQVKFENLNSSGDTIRIVGIAAGAYHSLALADDGSVWCWGYNICILNIIVVPCESQIQKNTSFYFYCAFLELHPPDSSADTPEEGSKALLKICSVKAGGMMSLAIDNLGALWMWGNCPQKSKEGGFSLVSSFIPTPVWDFHGHTVVKIACGNEHVVALVTAGESYVGEDLVCYSWGNNSHGQLGLGDRESRPQPEVLIAFDQESPWAIYEVACGAFHTALLTHKKSPRDTSASMCWTFGLGDNGQLGHGTTQSELLPMLVKELPQHVRLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDASFTGTDPGDALSPLLISCSPHQPRFPGPVQVACGAAHTVVVAEEGYKLWSWGRGRSGVLGNGKAVDFYNPTLVLWPPLIEDFNQEEVKSTETVAEMDEKLASALNELKLLQTRFSAMERYASILHGSIFGKPFDESDIPVSLKNSGVFDIAKEWEGMLEEADRSKLIRLEMFYRNMIAGVKDKLMKKRIKELIKECLQSSEFAK | 565 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi05g0568 | 565 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 291 | 343 | IPR000408 | - | |
| Mibi05g0568 | 565 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 269 | 279 | IPR000408 | - | |
| Mibi05g0568 | 565 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 167 | 219 | IPR000408 | - | |
| Mibi05g0568 | 565 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 15 | 100 | - | - | |
| Mibi05g0568 | 565 | SUPERFAMILY | RCC1/BLIP-II | 13 | 102 | IPR009091 | - | |
| Mibi05g0568 | 565 | Gene3D | - | 3 | 226 | IPR009091 | - | |
| Mibi05g0568 | 565 | Gene3D | - | 227 | 460 | IPR009091 | - | |
| Mibi05g0568 | 565 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 78 | 88 | IPR000408 | - | |
| Mibi05g0568 | 565 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 34 | 91 | IPR000408 | - | |
| Mibi05g0568 | 565 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 228 | 282 | IPR000408 | - | |
| Mibi05g0568 | 565 | SUPERFAMILY | RCC1/BLIP-II | 149 | 438 | IPR009091 | - | |
| Mibi05g0568 | 565 | PRINTS | Chromosome condensation regulator RCC1 signature | 402 | 423 | IPR000408 | - | |
| Mibi05g0568 | 565 | PRINTS | Chromosome condensation regulator RCC1 signature | 35 | 51 | IPR000408 | - | |
| Mibi05g0568 | 565 | PRINTS | Chromosome condensation regulator RCC1 signature | 167 | 183 | IPR000408 | - | |
| Mibi05g0568 | 565 | PRINTS | Chromosome condensation regulator RCC1 signature | 206 | 222 | IPR000408 | - | |
| Mibi05g0568 | 565 | PRINTS | Chromosome condensation regulator RCC1 signature | 333 | 351 | IPR000408 | - | |
| Mibi05g0568 | 565 | PRINTS | Chromosome condensation regulator RCC1 signature | 75 | 88 | IPR000408 | - | |
| Mibi05g0568 | 565 | Coils | Coil | 454 | 474 | - | - | |
| Mibi05g0568 | 565 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 344 | 405 | IPR000408 | - | |
| Mibi05g0568 | 565 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 344 | 402 | IPR000408 | - | |
| Mibi05g0568 | 565 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 294 | 339 | IPR000408 | - | |
| Mibi05g0568 | 565 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 33 | 88 | IPR000408 | - | |
| Mibi05g0568 | 565 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 231 | 279 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi05g0568 | Mibi-ChrMibi05 | 5466497 | 5469179 | Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi05g0568 | 05 | 5466497 | 5469179 | Mibi05g0568 | 05 | 5466497 | 5469179 | ECH |