Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0542 ATGGGATCTCAGGATTCGCAGATGAAGATCGTCCATGGCGAGTTTGGTTACATACTCGAGGACGTTCCTCACTTCAATGACTATATTCCTAGTCTTCCCACATACCCAAATCCGCTGCGATCTAACACGGCTTATTCAGTTGTGAAGCAGTATTTTGTTGACGTCGATGACACTGTCCCTCAGAAGATTGTCGTTCATAAGGATAGTCCAAGGGGTGTACATTTTCGACGTGCAGGGCCCCGCCAAAAGGTATATTTTAAGTCAGATGAAGTGCTTGCGTGCATTGTTACATGTGGTGGTCTTTGCCCTGGACTCAACACTGTGATAAGGGAAATAGTCTGTGGTCTATCTCACATGTACGGTGTCAACAAAGTCCTTGGTATAGATGGGGGTTACAGAGGTTTCTACTCCAAGAACACCATTACTTTAACACCCAAGGTGGTCAATGATATCCATAAGCGTGGGGGTACCATTCTTGGGACATCACGAGGGGGGCATGATACGTCCAAGATAGTTGACAGCATACAGGATCGTGGAATTAACCAGGTTTATATTATTGGAGGAGATGGAACCCAAAAAGGAGCAGCTGTGATTTATGAGGAAATTAGAAGGCGGGGTCTCAAAGTAGCAATTGCTGGAATTCCCAAGACCATAGATAATGACATTCCGGTTATTGATAAATCCTTTGGCTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAGGCTGAAAGTATTGAAAATGGGATTGGTGTTGTAAAGCTGATGGGACGCTACAGCGGTTTCATTGCAATGTATGCTACTCTTGCTAGTAGAGACGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAGGGAAAGGGCGGACTTTTTGAATTTATTGAAAAAAGGCTAAAAGAAAATGGTCATATGATCATAGTCATTGCGGAGGGAGCAGGACAAGATCTTCTTACAGAAAGTATGCAGGCTGCGAACCAGAAGGATGCTTCTGGAAACAAATTGCTTCAAGATGTTGGTCTATGGATATCTCAGAGTATTAAGGATCATTTTGCAAAGCAAAATAAGATGGCTATTACTCTCAAATATATTGATCCTACTTACATGGTCCGGGCAATTCCAAGCAATGCATCGGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGTGCAATGGCCGGGTATACAGGATTCACAGTCGGGCTGGTCAATGGCAGACATACATATATTCCATTCAATAGAATCACCGAGAGGCAAAACAAGGTTGTGATAACAGACAGAATGTGGGCGAGACTTCTTTCTTCGACCAACCAGCCGAGTTTTTTGAGCCCCAAAGATGTTAATGAAGCCAAAAAGGAAAATCCGCCTCCAACTCAGTTGTTAGATAATGACAACTGCGTAAATGGACAACAGTCAGAAAAACAAGCTTACAGCAAGAGGGTTAATGGAACTAAAAACTAA 1491 0.4359 MGSQDSQMKIVHGEFGYILEDVPHFNDYIPSLPTYPNPLRSNTAYSVVKQYFVDVDDTVPQKIVVHKDSPRGVHFRRAGPRQKVYFKSDEVLACIVTCGGLCPGLNTVIREIVCGLSHMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGAAVIYEEIRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMIIVIAEGAGQDLLTESMQAANQKDASGNKLLQDVGLWISQSIKDHFAKQNKMAITLKYIDPTYMVRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRHTYIPFNRITERQNKVVITDRMWARLLSSTNQPSFLSPKDVNEAKKENPPPTQLLDNDNCVNGQQSEKQAYSKRVNGTKN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0542 496 FunFam ATP-dependent 6-phosphofructokinase 87 277 - -
Mibi05g0542 496 PIRSF ATP_PFK_TP0108 1 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Mibi05g0542 496 PRINTS ATP-dependent phosphofructokinase family signature 179 195 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mibi05g0542 496 PRINTS ATP-dependent phosphofructokinase family signature 308 320 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mibi05g0542 496 PRINTS ATP-dependent phosphofructokinase family signature 230 248 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mibi05g0542 496 PRINTS ATP-dependent phosphofructokinase family signature 212 229 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mibi05g0542 496 PRINTS ATP-dependent phosphofructokinase family signature 95 114 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mibi05g0542 496 PRINTS ATP-dependent phosphofructokinase family signature 251 267 IPR022953 GO:0003872|GO:0006002|GO:0006096
Mibi05g0542 496 MobiDBLite consensus disorder prediction 468 496 - -
Mibi05g0542 496 MobiDBLite consensus disorder prediction 450 496 - -
Mibi05g0542 496 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 22 452 IPR012004 GO:0003872|GO:0005524|GO:0006096
Mibi05g0542 496 Coils Coil 235 255 - -
Mibi05g0542 496 SUPERFAMILY Phosphofructokinase 26 459 IPR035966 GO:0003872|GO:0006096
Mibi05g0542 496 Gene3D - 88 277 - -
Mibi05g0542 496 Pfam Phosphofructokinase 94 399 IPR000023 GO:0003872|GO:0006096
Mibi05g0542 496 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 4 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0542 Mibi-ChrMibi05 5254113 5259369 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0542 05 5254113 5259369 Mibi05g0542 05 5254113 5259369 ECH