Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0415 ATGGTTTGCGCACTTACAGGATCTTTTAGTCCACCGCTGAGGAATTTGTTATGGGCCACATCGAAGCATGATGTATACCTTATGCAAAACTACTCTGTGATTCATTGGTCGTCTTTGCTTCGAAGGAGTAAAGAAGTACTTAACGTGGTGAAACCCATTGTTCCAACTGTTAAGCTCCCTGGATTTTTGGCTCAACCTATCTCCAGAGTACAAATAAGCACCATGACCGTTAAGGAAAATTTAATGGTGGCAGGTGGTTTCCAGGGTGAGCTTATTTGCAAGAATCTGAATCAATCTGGAGTTGCTTTCTGTGGTAAAGTAACTACTGATGATAACGGTATAACCAATGGTGTGGATGTTTACCATACTGCCAGCGGTTCTTTGAGGGTCATGGCAGCAAATAATGATGCCCAAGTTCGGGTTTTTGATGCTGATAATTTTTCATCTCTTGGCTGCTTCAAATATGACTGGTCTGTTAATAATATTTCCGCTAGTCCTGATGGAAAGTTGTTAGCTGTTCTTGGGGATAGTACTGAGGGTTTGATAGCTGATGCTAACACCGGAAAGGTTACTGGGAGGCTGACAGGACACCTGGACTATTCTTTTGCCTCTGCATGGCACCCAGATGGGCGAATATTGGCTACTGGGAATCAGGACACAACATGTAGGTTGTGGGACATTAGAAATCTTTCACGCTCCATTGCTGTACTCAAGGGAAGAATGGGTGCGGTAAGAGCCCTAAGGTTCACTTCAGATGGACGGTTTCTGGCTATGGCTGAGCCTGCAGATTTCATCCATATTTTTGACTCTCACAGTGAGTACCAACAAGGACAAGAAATTGATTTGTTTGGTGAGATTGCTGGGATTTCCTTTAGCCCTGACACGGAGGCTCTATTTGTTGGTATTGCTGATCGAACTTATGGAAGCTTGTTAGAGTTCAACAGGAAACGTTTTAATCAATATCTTGACTCCATGTTTTAG 981 0.4322 MVCALTGSFSPPLRNLLWATSKHDVYLMQNYSVIHWSSLLRRSKEVLNVVKPIVPTVKLPGFLAQPISRVQISTMTVKENLMVAGGFQGELICKNLNQSGVAFCGKVTTDDNGITNGVDVYHTASGSLRVMAANNDAQVRVFDADNFSSLGCFKYDWSVNNISASPDGKLLAVLGDSTEGLIADANTGKVTGRLTGHLDYSFASAWHPDGRILATGNQDTTCRLWDIRNLSRSIAVLKGRMGAVRALRFTSDGRFLAMAEPADFIHIFDSHSEYQQGQEIDLFGEIAGISFSPDTEALFVGIADRTYGSLLEFNRKRFNQYLDSMF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0415 326 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 13 323 - -
Mibi05g0415 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 194 229 - -
Mibi05g0415 326 SMART WD40_4 230 269 IPR001680 GO:0005515
Mibi05g0415 326 SMART WD40_4 146 184 IPR001680 GO:0005515
Mibi05g0415 326 SMART WD40_4 187 226 IPR001680 GO:0005515
Mibi05g0415 326 Pfam WD domain, G-beta repeat 190 226 IPR001680 GO:0005515
Mibi05g0415 326 ProSitePatterns Trp-Asp (WD) repeats signature. 213 227 IPR019775 -
Mibi05g0415 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 235 IPR001680 GO:0005515
Mibi05g0415 326 FunFam WD-40 repeat family protein 107 323 - -
Mibi05g0415 326 SUPERFAMILY WD40 repeat-like 65 313 IPR036322 GO:0005515
Mibi05g0415 326 Gene3D - 102 321 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0415 Mibi-ChrMibi05 3992210 3994760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0415 172 306 Miscellaneous Gene Families AT5G08390 31.333 1.36e-12 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0415 05 3992210 3994760 Mibi05g0415 05 3992210 3994760 ECH