Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0413 ATGCAGCTGTCAGCCATTATCCTTGCGTGCTTTCTCCTTCTCCTCCTCTCTCACTCGGTGGCCCATGCCGAGTCAGCTCAGTCACCGCCATTCGCCTGTGACTGGTCCAATCCTGCAACCAAATCCTACCCATTCTGCGATTCCAAGCTTAAAGTATCTCAAAGAGCACAAGACCTTGTTTCCCGACTCTCATTGGACGAAAAGCTAGCTCAACTAGTAAACGACGCACCTCCCATTCCTCGACTCGGTATCCCACCTTATCAATGGTGGAATGAGGCCTTACACGGTGTCTCTGGCGTCGGACGTGGCATTCGATTCAATGGGTCCATTTCTTCTGCTACTAGCTTCCCTCAAGTCATTCTCTCTGCTGCTACCTTCGACTCCCACCTCTGGTACAAAATCGGTCAGGCCATTGGAGTGGAAGCGAGGGCAATTTATAATGCAGGGCAAGCAATGGGGATGACATTTTGGGCTCCCAACATTAACATATTTAGGGATCCAAGATGGGGGAGAGGGCAAGAGACGGCTGGTGAAGATCCTATGGTTAGTTCTAAGTATGCTGTGTCGTATGTGAGAGGCGTACAGGGTGATTCCTTTCAGGGAGGTGAACTCACTGGTCATCTTCAAGCTTCTGCTTGTTGCAAGCATTTCACCGCCTATGATTTGGATAATTGGAAGGGTGTGAATCGCTTCGACTTCGATGCTCGCGTCACTTTGCAAGATTTATCGGACACATATCAGCCTCCATTCCAGAGTTGCATAGAGCAAGGACATGCAAGCGGGATAATGTGCGCTTATAACCGAGTGAATGGAGTTCCAAACTGCGCAGATTTCAATCTCTTAACTGGAACGGCCAGAAAACAATGGGGTTTCCATGGGTACATCACTTCCGATTGTGGCGCAGTCTCACTCCTTCATCATGATCAAGGATATGCGAAATCGGCGGAGGATGCCGTGGCCGATGTCCTTCGGGCTGGAATGGACGTAGAGTGCGGTGATTACTTGACGAAGTATGCTAAATCAGCAGTGGTCCAGAAAAAACTACCAATATCTCAAGTAGATCGTGCACTTCACAACCTGTTCTCAATAAGAATAAGGCTGGGTCTATTCGATGGGAATCCAGAAAAGCTCGCCTTTGGCACGATCGGCCCTAATCAAGTTTGTTCAAAAGATCACCTGTATTTAGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCACTCCCTAAAGCAAAACCCACAATTTCCCTTGCGCTCATAGGTCCTAACGCCAACGCTTCCCCATTAACTCTACTTGGAAACTATGCAGGCCCTCCCTGTAAACTTGTGACGCCATTGCAGGCCTTTCAGCACTATGTCAAGAGCACCATTTATCACCCTGGTTGTGATGATGGGGTCAAGTGTTCTTCTGCTCAGATTGACAAAGCCGTGGAAATCGCCGCGAAGGTGGATTACGTTGTGCTGATGATGGGATTGGATCAAAGTCAAGAGAGAGAAGATCGTGACCGGGTTCACCTGGACTTACCTGGCAAGCAACTTGAACTCATACACAGCGTTGCTAAAGCTTCCAAAAGGCCAGTCATCTTGGTGATCTTTTCTGGAGGCCCTCTTGATATTTCTTCCGCCAAGTATAACAACAAAGTTGGAGGCATCCTCTGGGCAGGCTATCCCGGAGAAGCTGGAGGAATCGCACTTGCACAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCAGTGACTTGGTACCCAAAAGATTTCATAAGAGTGCCAATGACAGATATGAGGATGCGAGCCGATACATCTTCTGGGTATCCCGGAAGGACTTACCGGTTTTACAAGGGTCCAAAGGTGTATGAGTTCGGCTATGGCCTAAGCTACTCTGGATATTCCCACGAGTTTGTCTCTGTCACACAAAACAAGCTTCACTTGAATCAATCATGGCCTTATTTGGTAGTTGAGAATGCGGAAACCATTCGCATCAAATCAGTATCAGAGATGGGCGCAAAATTGTGCCAAAGCATGTCAGTGTCAGTGACGATTGGGGTTAAAAATCATGGAAGTATGGAAGGGAAGCATTCGGTGTTGCTATATACAAGGCATGCGAAACAAAGAAGTGGGAACCCGATCAAACAATTGGTGGGCTTTGAGAGTGTAATGTTAGGTGCAGGGGAAAGAGCAGAAGTTGGGTTTGAGATAAGGCCTTGTGAGCATCTGAGCAGAGCAAGTGAGGGTGGATCCAAAGTAATTGAAGAAGGGTCCCATGTGTTGATTGTGGAGGATGAAGAGTATCCAATTGACGTCATTTTCTGA 2340 0.4774 MQLSAIILACFLLLLLSHSVAHAESAQSPPFACDWSNPATKSYPFCDSKLKVSQRAQDLVSRLSLDEKLAQLVNDAPPIPRLGIPPYQWWNEALHGVSGVGRGIRFNGSISSATSFPQVILSAATFDSHLWYKIGQAIGVEARAIYNAGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPMVSSKYAVSYVRGVQGDSFQGGELTGHLQASACCKHFTAYDLDNWKGVNRFDFDARVTLQDLSDTYQPPFQSCIEQGHASGIMCAYNRVNGVPNCADFNLLTGTARKQWGFHGYITSDCGAVSLLHHDQGYAKSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQKKLPISQVDRALHNLFSIRIRLGLFDGNPEKLAFGTIGPNQVCSKDHLYLALEAARNGIVLLKNSARLLPLPKAKPTISLALIGPNANASPLTLLGNYAGPPCKLVTPLQAFQHYVKSTIYHPGCDDGVKCSSAQIDKAVEIAAKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVILVIFSGGPLDISSAKYNNKVGGILWAGYPGEAGGIALAQIIFGDHNPGGRLPVTWYPKDFIRVPMTDMRMRADTSSGYPGRTYRFYKGPKVYEFGYGLSYSGYSHEFVSVTQNKLHLNQSWPYLVVENAETIRIKSVSEMGAKLCQSMSVSVTIGVKNHGSMEGKHSVLLYTRHAKQRSGNPIKQLVGFESVMLGAGERAEVGFEIRPCEHLSRASEGGSKVIEEGSHVLIVEDEEYPIDVIF 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0413 779 Pfam Fibronectin type III-like domain 703 770 IPR026891 -
Mibi05g0413 779 Gene3D - 389 637 IPR036881 GO:0004553|GO:0005975
Mibi05g0413 779 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 404 639 IPR036881 GO:0004553|GO:0005975
Mibi05g0413 779 FunFam probable beta-D-xylosidase 2 389 637 - -
Mibi05g0413 779 Gene3D - 55 378 IPR036962 GO:0004553|GO:0005975
Mibi05g0413 779 SMART Fn3_like_2 702 772 IPR026891 -
Mibi05g0413 779 Pfam Glycosyl hydrolase family 3 N terminal domain 110 360 IPR001764 GO:0004553|GO:0005975
Mibi05g0413 779 Gene3D Immunoglobulins 665 777 IPR013783 -
Mibi05g0413 779 SUPERFAMILY (Trans)glycosidases 43 402 IPR017853 -
Mibi05g0413 779 PANTHER SUGAR HYDROLASE-RELATED 21 775 IPR044993 GO:0009044|GO:0045493
Mibi05g0413 779 Pfam Glycosyl hydrolase family 3 C-terminal domain 404 636 IPR002772 GO:0004553|GO:0005975
Mibi05g0413 779 PRINTS Glycosyl hydrolase family 3 signature 116 135 IPR001764 GO:0004553|GO:0005975
Mibi05g0413 779 PRINTS Glycosyl hydrolase family 3 signature 284 302 IPR001764 GO:0004553|GO:0005975
Mibi05g0413 779 PRINTS Glycosyl hydrolase family 3 signature 210 226 IPR001764 GO:0004553|GO:0005975
Mibi05g0413 779 FunFam probable beta-D-xylosidase 7 55 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0413 Mibi-ChrMibi05 3961577 3965850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0413 20 777 Glycoside Hydrolase AT1G78060 63.863 0.0 1002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0413 05 3961577 3965850 Mibi05g0413 05 3961577 3965850 ECH