Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0389 ATGGATTTGTCAGGTGCTCAGTCGGGCCTATCTCTCGGATTGAACTCTCAGATTTCGTCACCGGCTTTGTCAGGTTATGTCGATGATAATTTAGCTTCCTTTCGACAGAATTCGGGCTTTCGTAGTTCCTCTAGTACAGCGCCTTTTGGTCCGTTGCAACTGCTCGAGGAAAAAGACGACAAGGTGAGGGTCGAATCGGGTGAAGAAACAGAGGAGGAGGAAGATGAGGGGGAGGAAGGAGCTGTGGAAAATGAGGCGATCGATTTTATGGGTCGGCCTGTCTGTGCCAAGAGGAAATTAGAGGTACAGCCGAATTTCTCTTCGAATCCTCCGAAGCGGCTTTCTGTCGATTCGAGGCGAGCTTCAGTGCAGGCTTTGGCGAATCAGCCAATGGAAGTAGCTGACCCTGAGATTCATGAATTAATGGGGAAGGAAAAGCGGAGACAGTTCACAGGAATAGAATTGATTGCTTCTGAGAATTTCGTTTGCAGAGCTGTCATGGAAGCTTTGGGAAGTCATTTGACGAACAAGTACTCTGAGGGAATGCCTGGAGCTAAATACTACACAGGGAATCAGTTTATTGATCAGATTGAATTTCTTTGCTGTAAGCGTGCATTGGCTGCATTTGATCTCCATCCAAGCAAGTGGGGCGTTAACGTTCAGCCTTATTCATGTACTTCTGCCAACTTTGCCGTGTACACTGGTATATTGCTTCCTGGGGATCGAATCATGGGCTTGGATCTGCCATCCGGTGGGCATTTGAGTCATGGATATTATACCCATGGTGGGAAGAAGATTTCTGCCGCATCGATTTTCTTTGAAACTCTTCCCTACAAAGTCAATCCTCTAACAGGCTACTTAGACTATGACAAGCTTGAAGAAAAAGCCTGCGATTATCGTCCTAGACTACTTATATGCGGAGGTAGTTCGTATCCTAGAGAATGGGATTATGCAAGGTTCAGGAAGATTGCTGATAAGTGTGGGGCTGTTCTGATGTGTGACATGGCGCATATTAGTGGGCTTGTGGCAGCTAAGGAAGTTGCTAGCCCGTTTGATTACTGTGATATTGTTACTTCAACAACCCACAAAAGTCTCCGGGGTCCAAGGGGAGGTATCATCTTTTATAGGAAAGGTCCAAAACCCAGGAAGCAAGGCATAGCTCTTAATCATGGGGATGAGGGTAATTATGACTTGGAGGAAAAGATAAACTTTGCTTTATATCCATCCTTACAAGGAGGCCCGCACAATAATCATATTGCTGCTCTTGCCATAGCCTTAAAACAAGTTGCAACTCCAGAATACAAAGTATATATGCAACAGGTGAGGAAAAATGCACAGGCGTTAGCATCTGCTTTGTTGAAAAGAAAATGCAGGCTGGTAACTGATGGCACCGACAATCACTTGTTGCTCTGGGACCTTACTGCACTCGGCTTACTTGATAGAAATTATGAGAAGGTCTGTGAGGCTTGTAATATCACCCTCAACAAATGTGCCATTTATGGTTCTATTTCACCTGGAGGAGTGAGAATCGGTACTCCTGCAATGACCTCGAGAGGTTGCTTAGAGGATGATTTTGAGATCATAGCTGATTTTCTTCTGAAGGCAGCACAGGTTACTGGCAATATACAGAAGGAATACGGAAAATCTTGTAAGGATTTCCTCAAAGGTCTTCAAAATAATAAAGATATTATTGAGCTCAGAAATCAGGTTGAGGCATTTGCTTCCGATCTTCCAATGCCCGCATGTGATTTTTGA 1755 0.4462 MDLSGAQSGLSLGLNSQISSPALSGYVDDNLASFRQNSGFRSSSSTAPFGPLQLLEEKDDKVRVESGEETEEEEDEGEEGAVENEAIDFMGRPVCAKRKLEVQPNFSSNPPKRLSVDSRRASVQALANQPMEVADPEIHELMGKEKRRQFTGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAKYYTGNQFIDQIEFLCCKRALAAFDLHPSKWGVNVQPYSCTSANFAVYTGILLPGDRIMGLDLPSGGHLSHGYYTHGGKKISAASIFFETLPYKVNPLTGYLDYDKLEEKACDYRPRLLICGGSSYPREWDYARFRKIADKCGAVLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIIFYRKGPKPRKQGIALNHGDEGNYDLEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKVYMQQVRKNAQALASALLKRKCRLVTDGTDNHLLLWDLTALGLLDRNYEKVCEACNITLNKCAIYGSISPGGVRIGTPAMTSRGCLEDDFEIIADFLLKAAQVTGNIQKEYGKSCKDFLKGLQNNKDIIELRNQVEAFASDLPMPACDF 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0389 584 MobiDBLite consensus disorder prediction 66 81 - -
Mibi05g0389 584 MobiDBLite consensus disorder prediction 36 50 - -
Mibi05g0389 584 MobiDBLite consensus disorder prediction 36 81 - -
Mibi05g0389 584 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 121 582 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mibi05g0389 584 FunFam Serine hydroxymethyltransferase 160 378 - -
Mibi05g0389 584 Hamap Serine hydroxymethyltransferase [glyA]. 130 581 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mibi05g0389 584 Gene3D Aspartate Aminotransferase, domain 1 135 580 IPR015422 GO:0003824
Mibi05g0389 584 Gene3D - 160 439 IPR015421 GO:0003824
Mibi05g0389 584 CDD SHMT 135 573 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Mibi05g0389 584 Pfam Serine hydroxymethyltransferase 132 531 IPR039429 -
Mibi05g0389 584 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 355 371 IPR019798 GO:0030170
Mibi05g0389 584 SUPERFAMILY PLP-dependent transferases 120 581 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0389 Mibi-ChrMibi05 3770519 3774015 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0389 05 3770519 3774015 Mibi05g0389 05 3770519 3774015 ECH