Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0373 ATGCATCCCTTTTGCTGTGTCTCCGCCGTCTCCGACCAGTCTTCGCCGGTCAAACCCTCTTCTGATCCATTCCTTACTTTCCACATGCCTCCTCCTCCTCCTCCTCCCGCCATTCGATCCGATTCCATTCCTCGCCCCAATAATCACAACCACACGCTCAGCAATCATCATGGCGGCTTCTGCGAGCAGCCTGTGGTGGTGGATGTGAAGATCAATGACTTGGTTGGGAATGGAATCTCGGGGGTATTGTATAAGTGGGTCAATTACGGTAAGGGATGGAGGCCTCGATGGTTTGTCCTTCAAGACGGTGTCCTTTCTTACTATAAGATCCACGGCCCTGATAAGATCCTCGTTAATAAGGAAACTGAGAAGGGTTCTAAGGTCATTGGTGAAGAATCCTTGCGGATGATCTCGCGTAACCGTAATTCTTATTCCCCTCATCACCAGCCCCTCCATCGACGAAAGCCCTTCGGAGAAATCCATCTCAAGGTTTCGACTATTCGCGAAAGCAGGTCGGATGACAAGCGGTTTTCCATTTTCACTGGCACTAAGAGACTCCACTTGAGGGCTGAGACCCGTGAAGATCGAGTGGCATGGGTGGAGGCATTGCAGGCAGTGAAAGATATGTTCCCTCGAATGTCCAACAGTGAGCTGATGGCTCCGTTAGACTATCTAACGGTATCAACGGACAAACTGAGACAACGGCTTCTGGAAGAAGGTGTAAGTGAGGCAGCCATCCAAGAAAGTGAACAGATTATGAGAAGTGAATTTGTGGCGCTACAAAACCAGCTTGTGCTGCTGAAGCAGAAGCAATTGATTCTCACTGACACATTACGACAGCTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTTGTTGACGAGAGCCAAAGACAGTTGAATGATGAAGAGGCCTTTTCCAGATTAAAGCATGAAAAGTTTAGTGAAGGAAGTGCGAGTGAATCTGAGGATTATAATGAGAGAAATGATGCTGCAGAAGAAGAAACGGATGATGATGACAATGCATTTTTTGACACACGAGACTTTCTATCATCCAGTTCTTTTAAAAGTAATGGGTCTGATTATAGGGTTTCATCTTTCTCTTCGGACGATGAAGGACAATACATGATAGAGTCAGAGGAAGACGTAGATCCATCAATAAGATCAGTTGGAACCAGCTATCCCTATGTCAAAAGGCGTAAGAAATTGCCTGATCCTATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAGGATCTAACCAAAGTATGTCTTCCTGTTTATTTCAATGAACCTCTTTCATCTTTACAAAAATGTTTTGAAGAAATGGAGTACTCATACCTCTTGGATCGAGCATATGAATGGGGAAAAAGGGGTAATAGCCTCATGAGGATTCTTAACGTGGCTGCCTTTGCTGTATCTGGCTATGCCTCAACTGAAGGAAGAATTTGCAAACCATTTAATCCGTTACTAGGGGAAACATATGAGGCTGATTACCCAGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTTAGTCATCACCCTATGATAGTTGCATGTCACTGTCAAGGTACAGGCTGGAAATTTTGGGGAGATAGCAACTTAAGGAGCAAATTCTGGGGCCGATCAATTCAGCTTGATCCTGTTGGTATTTTGACTTTAGAATTTGATGATGGGGAAGTTTTTCAGTGGAGTAAGGTGACAACGTCAATATACAATCTTATACTGGGGAAGCTTTACTGTGATCATTACGGAACAATGCGTATACAAGGAAATGGAGATTACTCATGTAAACTGAAATTCAAGGAGCAATCTATAATCGATCGAAATCCCCACCAGGTACATGGTATTGTACAAGATAAAAATGGAAAAACTGTGGCAACTCTTTTCGGAAAATGGGATGAAAGTATGCATTATGTTTCTGGAGACTTTGCTGTGAAGGGAAAAGGTTATGACTCTTTGTCAGAAGCGCGAGTCCTGTGGAAGCGGAGCAAGCCTCCAAAGTTTCCTACTAGATATAATTTCACTCGCTTTGCCATCACATTAAATGAACTTACACCCGGATTGAAGGAAAGGTTGCCACCAACAGATTCCAGGTTGAGGCCAGACCAAAGGTATTTGGAAAACGGTGAGTATGAAATGGCGAATTCAGAAAAGTTGCGGCTAGAGCAGCGGCAACGCCAGGCTCGGAAGATGCAGGAAAGTGGTTGGAAACCTCGGTGGTTTGCCTTTGACAAAGCAAGCGGCACACACCGCTATTTGGGAGGATATTGGGAAGCCAGGGAACGAGGAAACTGGGAATCTTGCCCCAACATTTTTGGTCAAATCCCCTCTGACCATCTTTCTGATTGA 2373 0.4433 MHPFCCVSAVSDQSSPVKPSSDPFLTFHMPPPPPPPAIRSDSIPRPNNHNHTLSNHHGGFCEQPVVVDVKINDLVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKILVNKETEKGSKVIGEESLRMISRNRNSYSPHHQPLHRRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTVSTDKLRQRLLEEGVSEAAIQESEQIMRSEFVALQNQLVLLKQKQLILTDTLRQLETEKVDLENTVVDESQRQLNDEEAFSRLKHEKFSEGSASESEDYNERNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDEGQYMIESEEDVDPSIRSVGTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGKRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCQGTGWKFWGDSNLRSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNGDYSCKLKFKEQSIIDRNPHQVHGIVQDKNGKTVATLFGKWDESMHYVSGDFAVKGKGYDSLSEARVLWKRSKPPKFPTRYNFTRFAITLNELTPGLKERLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPRWFAFDKASGTHRYLGGYWEARERGNWESCPNIFGQIPSDHLSD 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0373 790 CDD PH_ORP_plant 79 215 - -
Mibi05g0373 790 Gene3D - 77 210 IPR011993 -
Mibi05g0373 790 Coils Coil 719 739 - -
Mibi05g0373 790 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 78 768 IPR000648 GO:0008289
Mibi05g0373 790 MobiDBLite consensus disorder prediction 304 326 - -
Mibi05g0373 790 Coils Coil 278 298 - -
Mibi05g0373 790 MobiDBLite consensus disorder prediction 304 343 - -
Mibi05g0373 790 Gene3D - 500 674 - -
Mibi05g0373 790 Gene3D - 711 771 - -
Mibi05g0373 790 Pfam Oxysterol-binding protein 414 769 IPR000648 GO:0008289
Mibi05g0373 790 FunFam oxysterol-binding protein-related protein 1D isoform X1 500 672 - -
Mibi05g0373 790 SUPERFAMILY PH domain-like 79 214 - -
Mibi05g0373 790 MobiDBLite consensus disorder prediction 25 41 - -
Mibi05g0373 790 SUPERFAMILY Oxysterol-binding protein-like 409 786 IPR037239 -
Mibi05g0373 790 SMART PH_update 77 210 IPR001849 -
Mibi05g0373 790 MobiDBLite consensus disorder prediction 43 57 - -
Mibi05g0373 790 FunFam Oxysterol-binding protein-related protein 2A 711 782 - -
Mibi05g0373 790 Pfam Pleckstrin homology domain 84 204 - -
Mibi05g0373 790 MobiDBLite consensus disorder prediction 11 57 - -
Mibi05g0373 790 MobiDBLite consensus disorder prediction 327 342 - -
Mibi05g0373 790 ProSiteProfiles PH domain profile. 76 208 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0373 Mibi-ChrMibi05 3630855 3637078 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0373 05 3630855 3637078 Mibi05g0373 05 3630855 3637078 ECH