Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0304 ATGAAAACAAAGCGGTACTCAAACGTCGTTGCGAAGAAGCTGTTTTACCGCCAAGGAAGCGTCGCCGGCGCTAATAGCTCAGAATCGAGTCTTCACGACGGAGGGATCGTAGTTCCGATGGAGTTACCGGAGTGTCCGGTTTGCCTCCAAACCTACGACGACGAGAATACAATCCCTAGGGTTCTTTCCTGTGGTCACTCCATTTGTGAAGCTTGCCTTCTTGAACTCCCCCAGCGATATCCCACCACCATTCGCTGCCCTTCTTGTACCCAACTCGTCAAATACTCTTCTCAGCAAGGCCCTTCTTCTCTCCCCAAGAACATCGACCTCCTCAGACTCGCTCTCCAACACTCTTCTTCCGATTTCCCGCAGAATTCGAAGCATCTTTCCGCTAAGAACGGTGGTGATCACTCTGAATTTTGTCCTCGCTTATGGTCCAACGAGTTATATGCCGCCTGGAAGGATTGGATTTTACCACACGACTTCGTTTCGATTGAGTCCGAACCCCCTCGATTCATTGCGTCTTCTTCTTTGAACGGTAGAGTTTGTATTAAAGAAAATCAGAGCCTGAACCTTGCTCCGATTGCTTCTTTACCGCCCGTCAATCTTTCTAAGCTCAAACTTAGTTATGAGGCTCGGATTATGATTTGTTTGGAGGGGATGAAAGAGGTTCAGAGGCAGGAGTTAGCGTTGATTCTTAAAGCGTCCAGGAAAAAGAGTGGGATATGTGATGCTTATGGCCTATGGAGCGACTTAGTAGATGGTAATCTATATTTAGTGTGTGAGAGACAAAATAGTAGTCTTACAGAGAAGTATAGTGAGTTGAGAAGTGGGCTCGTCGGACTCGCTGGAGATGCTTTGAATAGAGATGGATTTGTTAGTTTTTCAATGATGGGTTTGAGTATTTGTGAAGCCTTGATTGCTCTGCACACTGAAGGTTTGGTTGCCGGTTATTTTGGACTTTCTTGCTTCTGTTTTGATGAGCTCGGTGGCATTTATTTTAATATGAATGATGCATTAGCGAAGGGAAGGAAGGTTCGTTTGGATCTAATGGATGCCATCTCCAGTGGCACTAGTAATGTAGTTAAGCTACAAGCAATCTTTGAGTATGTCTTTAAACATGAGAATTTCATTTGTCCGGAGGGTTTGTTTGAATTATTGCTGAAGGAGACTATTACTCTAGAGTGTGGGCACTCAAGGTACCCCGTTGGGTATAGCTCTGATGTATGGTCATTGGGTTGTGTGCTGCTGCGCCTTCTTTTTGGAAATGCTCTCCCCCAGTATGCATTTGAAATAAATGAGGAGAAGAAAGGCTCTGACCTTTTAGCTAATTATATTCGTTGGGTGGAGAGAGTTGATTCCTCGTTGGAAGAGAAATTGGGATCAGAGTTTTTGCTGCTGGGGCAGACTCTTAGAAAATGTTTGGAAATAGATCCAGGAAATCGCCCAGATGTGGCAGGCGTGAGAAAATGCATCTGGGATATGCTCATCAAACCTCCGTTTGATGTTTTAGGCACTTTGGAGGTTGCAATAGATAGAAGCAGTGCATATTGCTGCTTGATACTGGGGGAATTGTGTCAGATTCCCCAGGAATCCTCAAAACCAAAGAGCGAATTTGAGTTGCAGGACAGATTAGATGGTGATCTGCCAAATTTTTTTCAGGGCGGGAAGGATAAACCTAATGGAGATTTTGTTGGGGGCTCCTCAAAGGAAATGATTGAAGTTAAAGATATAAGAGGCCATCTTGATTGTATCACTGGATTAGTTGTTGGAGGGGGATTTCTGTTTAGCTCCTCATTCGATAAAACTGTCAATGTATGGTCATTGCAGGACTTTTCTCATTTACACACCTTTAGAGGTCATGAGAATAAAGTCATGGCTCTGGTTTATGTGGACGGAGAAGAACCCTTGTGCTTAAGTGGTGACAGTGGAGGGGCTATATTTATCTGGGGAATATCTTCCCCTTTTGGGCAACACCCATTGAGAAAGTGGAATGAGCAGAAGGATTGGCGTTTTAGTGGGATCCATTCTATGGTTGTTTCAAGAAATCTTTGCCTCTACACTGGTAGTGGTGATAGATCCATAAAAGCTTGGTCATTGAAGGATGGAACTCTTGTGTGCACAATGAATGGTCATACATCTGTTGTCTCCACACTTGCAATATGTGATGATGTTCTTTACAGTGGTAGTTGGGATGGTACAATTAGGTTGTGGAGTCTTAATGATCACAGCCTGTTGACTGTGCTGGGGGAAGATGTGCCTGGAGAGATGAAAGCCGTCCTGTCTATTGCAGTCGATAGGCATCATCTTGTTGCATCTCATGAAAATGGATGCATAAAGGTCTGGAGAAATGACATCTTCATGAGCTCCAAGACATTGCATAGTGGTGCCATTTTTGCTAGTAGTATTCAAGGGAAATTCCTCTATACAGGAGGTTGGGACAAAAAAGTTAATATACAGGAATTGACAGGAGATGAGTTTCAGCTGGTTGTCAATTCAATTGGGTATATTCCTTGCAGTTCTGTTGTAACAGCTTTGTTATGCTGGGAGGGAAAACTTTTTGTTGGGTTTGCTGATAAGTCTATCAAGGTTTATCATTGCAATCGTTAG 2610 0.4368 MKTKRYSNVVAKKLFYRQGSVAGANSSESSLHDGGIVVPMELPECPVCLQTYDDENTIPRVLSCGHSICEACLLELPQRYPTTIRCPSCTQLVKYSSQQGPSSLPKNIDLLRLALQHSSSDFPQNSKHLSAKNGGDHSEFCPRLWSNELYAAWKDWILPHDFVSIESEPPRFIASSSLNGRVCIKENQSLNLAPIASLPPVNLSKLKLSYEARIMICLEGMKEVQRQELALILKASRKKSGICDAYGLWSDLVDGNLYLVCERQNSSLTEKYSELRSGLVGLAGDALNRDGFVSFSMMGLSICEALIALHTEGLVAGYFGLSCFCFDELGGIYFNMNDALAKGRKVRLDLMDAISSGTSNVVKLQAIFEYVFKHENFICPEGLFELLLKETITLECGHSRYPVGYSSDVWSLGCVLLRLLFGNALPQYAFEINEEKKGSDLLANYIRWVERVDSSLEEKLGSEFLLLGQTLRKCLEIDPGNRPDVAGVRKCIWDMLIKPPFDVLGTLEVAIDRSSAYCCLILGELCQIPQESSKPKSEFELQDRLDGDLPNFFQGGKDKPNGDFVGGSSKEMIEVKDIRGHLDCITGLVVGGGFLFSSSFDKTVNVWSLQDFSHLHTFRGHENKVMALVYVDGEEPLCLSGDSGGAIFIWGISSPFGQHPLRKWNEQKDWRFSGIHSMVVSRNLCLYTGSGDRSIKAWSLKDGTLVCTMNGHTSVVSTLAICDDVLYSGSWDGTIRLWSLNDHSLLTVLGEDVPGEMKAVLSIAVDRHHLVASHENGCIKVWRNDIFMSSKTLHSGAIFASSIQGKFLYTGGWDKKVNIQELTGDEFQLVVNSIGYIPCSSVVTALLCWEGKLFVGFADKSIKVYHCNR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0304 869 Gene3D - 662 869 IPR015943 GO:0005515
Mibi05g0304 869 PRINTS G protein beta WD-40 repeat signature 726 740 IPR020472 -
Mibi05g0304 869 PRINTS G protein beta WD-40 repeat signature 686 700 IPR020472 -
Mibi05g0304 869 PRINTS G protein beta WD-40 repeat signature 595 609 IPR020472 -
Mibi05g0304 869 ProSiteProfiles Trp-Asp (WD) repeats profile. 709 748 IPR001680 GO:0005515
Mibi05g0304 869 Pfam WD domain, G-beta repeat 576 608 IPR001680 GO:0005515
Mibi05g0304 869 Pfam WD domain, G-beta repeat 705 739 IPR001680 GO:0005515
Mibi05g0304 869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 125 IPR013083 -
Mibi05g0304 869 SMART WD40_4 742 783 IPR001680 GO:0005515
Mibi05g0304 869 SMART WD40_4 611 651 IPR001680 GO:0005515
Mibi05g0304 869 SMART WD40_4 571 608 IPR001680 GO:0005515
Mibi05g0304 869 SMART WD40_4 702 739 IPR001680 GO:0005515
Mibi05g0304 869 SMART WD40_4 657 699 IPR001680 GO:0005515
Mibi05g0304 869 ProSiteProfiles Trp-Asp (WD) repeats profile. 578 617 IPR001680 GO:0005515
Mibi05g0304 869 SUPERFAMILY RING/U-box 44 96 - -
Mibi05g0304 869 PANTHER - 40 866 IPR044715 -
Mibi05g0304 869 SUPERFAMILY WD40 repeat-like 573 867 IPR036322 GO:0005515
Mibi05g0304 869 SUPERFAMILY Protein kinase-like (PK-like) 227 499 IPR011009 -
Mibi05g0304 869 Pfam RING-type zinc-finger 45 87 IPR027370 -
Mibi05g0304 869 ProSiteProfiles Zinc finger RING-type profile. 45 90 IPR001841 -
Mibi05g0304 869 Gene3D - 568 661 IPR015943 GO:0005515
Mibi05g0304 869 SMART ring_2 45 89 IPR001841 -
Mibi05g0304 869 CDD RING-HC_TRIM32_C-VII 44 90 - -
Mibi05g0304 869 Gene3D Transferase(Phosphotransferase) domain 1 300 496 - -
Mibi05g0304 869 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Mibi05g0304 869 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 709 741 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0304 593 811 Acyl Lipid Metabolism Gene Families AT3G18860 30.702 6.68e-15 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0304 05 3010997 3015171 Mibi05g0304 05 3010997 3015171 ECH