Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0242 ATGGTGCTGGTTTCGGCTGTACGGGATTATATCAGCCGAATGCTGCAAGACATCTCTGGCATGAAGGTTCTTATATTAGATTCTCAGACGGTAAGTATTGTCAGTGTTGTCTATTCACAGTCAGAGCTTCTTCAGAAAGAAGTCTTTTTGGTAGAGTTGGTGGATTCCATTTCGAAGTCCAAGGAATCTATGTCGCATCTCAAGGCTGTTTACTTCCTTCGACCAACTTCAGAGAACATCCAGCATTTGCGCCGCCATATAGCCAATCCTCGATTTGGAGAATATCATCTTTTTTTCTCCAATATGTTGAAGGACACTCAGATTCACATACTCGCCGATTCAGATGAACAGGAAGTTGTCCAGCAGGTTCAGGAGTTTTATGCAGACTTTGTTGCACTTGATCCTTACCATTTTACCTTAAATATGCCTTCAAATTACATTTATATGCTCCCAGCAATGGTGGATCCTTCAACATTGCAACGTTTCTGTGATCGGGCTGTTGACAGTATTGCTGCTGTTTTCTTGGCGTTAAAACGAAGACCCGTGATTAGATACCAAAGGACATCTGATGCTGCGAAAAGGATAGCACAGGAAGCAGCTAAAATGATGTACCAGCAGGAAAGTGGTCTTTTTGACTTTAGGCGAACAGAAGTTTCTCCATTATTATTGGTGATTGACCGGAGGGATGATCCTGTAACCCCATTGTTAAATCAATGGACCTATCAGGCAATGGTTCATGAACTAATAGGAATCCAAGATAACAAAGTAGACTTGAAATCCCTTGGCAAATTTCCAAAGGATCAGGAGGAAGTTGTGCTGTCATCAGAACAAGATTCTTTCTTCAAAGCCAACATGTATGAGAATTTTGGAGATATAGGTATGAATATCAAGCGATTAGTGGATGAATTTCAGCAAGTGGCAAAGAGTAACCAGAACATCCAGACAATAGAGGACATGGCTAAATTTGTTGACAATTACCCTGAATACAGAAAAATGCATGGAAATGTGTCAAAACATGTGGCCTTGGTAACAGAAATGAGCAGGATAGTTCAAGAGAGAAAGCTTATGTTAGTTTCAGAAGCAGAACAGGAGTTGGCTTGTAATGGAGGGCAAGGGGCTGCTTTTGAGGCAGTGACAAATCTGTTAAACAATGAAAGTATATCAGATGAGGATCGGTTACGTTTAGTCATGTTGTATGCTTTGCGGTATGAGAAGGATAGTCCTGTTCAATTAATGCAGCTTTTCAACAAACTAGCTTCCCGATCAGCCAAGTACAAGCCTGGGATTGTCCAGTTTCTTTTGAAGCAGGCAGGTGTTGACAAGAGAACCGGTGATCTTTATGGAAGTAGAGATCTACTAAATATTGCTCGGAACATGGCTCGTGGATTGAAGGGTGTGGAGAATGTATATACTCAACATCAGCCACTTCTGTTCCAAACAATGGAAAGTATTGTGAAAGGACGATTGAGGGATGTGGACTACCCTATTGTTGGAAATCATTTTCAGCAGGGAAGGCCACAGGAAGTCATCATCTTCATTGTTGGTGGGACGACTTATGAGGAGTCACGATGTGTTGCGATGCAAAACAACAACAATACTGGGATTCGTTTTATACTCTGTGGTACTGCAGTTCTTAATTCTAAGGGGTTTATTAGGGACTTGGAAGAAGCTCAGCGGGTAGCTCGATCTAGCTCCTCTATCGTGTGA 1707 0.4177 MVLVSAVRDYISRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKSKESMSHLKAVYFLRPTSENIQHLRRHIANPRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVALDPYHFTLNMPSNYIYMLPAMVDPSTLQRFCDRAVDSIAAVFLALKRRPVIRYQRTSDAAKRIAQEAAKMMYQQESGLFDFRRTEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLKSLGKFPKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVALVTEMSRIVQERKLMLVSEAEQELACNGGQGAAFEAVTNLLNNESISDEDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGIVQFLLKQAGVDKRTGDLYGSRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESIVKGRLRDVDYPIVGNHFQQGRPQEVIIFIVGGTTYEESRCVAMQNNNNTGIRFILCGTAVLNSKGFIRDLEEAQRVARSSSSIV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0242 568 Pfam Sec1 family 22 553 IPR001619 GO:0016192
Mibi05g0242 568 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 7 554 IPR001619 GO:0016192
Mibi05g0242 568 PIRSF VPS45_Sec1 1 565 IPR001619 GO:0016192
Mibi05g0242 568 FunFam Vacuolar sorting protein 3 128 - -
Mibi05g0242 568 Gene3D - 138 555 IPR027482 -
Mibi05g0242 568 SUPERFAMILY Sec1/munc18-like (SM) proteins 3 556 IPR036045 -
Mibi05g0242 568 Gene3D - 4 128 IPR043154 -
Mibi05g0242 568 Gene3D - 353 474 - -
Mibi05g0242 568 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0242 Mibi-ChrMibi05 2455217 2460251 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0242 05 2455217 2460251 Mibi05g0242 05 2455217 2460251 ECH