Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0206 ATGGGCTGCTCATTTTCAAAAATAGCTAAGTCAGCAGGTTATGAAGAACCCACTGTTCTTGCTGCTGAGACACCTTTCTCTGTGAGTGAAGTGGAGGCGCTACATGAGCTCTATAAGAAGTTGAGCAACTCCATTATTGAAGATGGCCTTATTCACAAGGAAGAATTCCAGCTGGCACTCTTCAGGAATAAAAACAAGAGAAATCTGTTTGCAGACAGGGTTTTTGACTTGTTTGATGTCAAGCGTAATGGGGTTATTGAATTTGGGGAATTTGTTCGATCATTGGCTGTTTTTCACCCAAATGCACCTAAAGAAGACAAGGTTACTTTTGCTTTTAGGTTGTATGATCTGAGGCAGACAGGATATATTGAACGAGACGAGCTGAAGGAGATGGTAGCGGCGCTTCTTCACGAATCAGATCTTGTACTTTCAGATGATATCATCGAAACCATGGTGGATAAGACATTTAGTGATGCTGATACAAAAGGTGATGGAAGGATTGATCAGGAGGAGTGGAAGGAATTTGTCTCAAAGCATCCAAATTTGATGAACAACATGACCCTTCCCTACTTAATGGATATAACCTTAGCGTTTCCAAGTTTTGTGGTGAGTACAGAAGTTGAAGACTCAGAGGTCTGA 639 0.4131 MGCSFSKIAKSAGYEEPTVLAAETPFSVSEVEALHELYKKLSNSIIEDGLIHKEEFQLALFRNKNKRNLFADRVFDLFDVKRNGVIEFGEFVRSLAVFHPNAPKEDKVTFAFRLYDLRQTGYIERDELKEMVAALLHESDLVLSDDIIETMVDKTFSDADTKGDGRIDQEEWKEFVSKHPNLMNNMTLPYLMDITLAFPSFVVSTEVEDSEV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0206 212 FunFam calcineurin B-like protein 3 16 209 - -
Mibi05g0206 212 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Mibi05g0206 212 Pfam EF hand 72 93 IPR002048 GO:0005509
Mibi05g0206 212 PRINTS Recoverin family signature 74 95 - -
Mibi05g0206 212 PRINTS Recoverin family signature 121 139 - -
Mibi05g0206 212 PRINTS Recoverin family signature 167 187 - -
Mibi05g0206 212 Pfam EF-hand domain pair 106 176 IPR002048 GO:0005509
Mibi05g0206 212 PANTHER CALCINEURIN B 10 210 IPR045198 GO:0005509|GO:0019722|GO:0019900
Mibi05g0206 212 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Mibi05g0206 212 CDD EFh 107 177 IPR002048 GO:0005509
Mibi05g0206 212 SUPERFAMILY EF-hand 19 201 IPR011992 -
Mibi05g0206 212 Gene3D - 16 210 - -
Mibi05g0206 212 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Mibi05g0206 212 SMART efh_1 151 179 IPR002048 GO:0005509
Mibi05g0206 212 SMART efh_1 70 98 IPR002048 GO:0005509
Mibi05g0206 212 SMART efh_1 107 135 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0206 Mibi-ChrMibi05 2041501 2043044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0206 24 212 EF-hand Containing Proteins AT5G24270 73.545 1.25e-100 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0206 05 2041501 2043044 Mibi05g0206 05 2041501 2043044 ECH