Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0195 ATGGAGAGGTCTAGATCTAAGAGGAACTACTACTATGACCAACAAGACTATGACTCTGAGACCTTGGCTAGGACCAGGCCCAGGTATAACCACCACTACGCAACTACCCCCCACCGCCATCGCGGCGGCGGAAGTGGTGGCCCTAGACCTAAGGCTCAAGACTCGTCTTTAACGGTGACCACAAGTTACCGCATTTTGTGCCATGATATAAAGGCTGGTGGAGTAATTGGCAAGTCAGGTAGCATTATAAAGTCCATTAGACAACACACTGGTGCGTGGATCAACGTTCACGAGCTGATCCCTGGCGATGAGGAGCGAATCATAGAGATTTCTGACACTCGCAGGCGAGACCCAGAAGGGAGAATGCCTTCGTTCTCGCCTGCGCAGGAGGCCTTGTTGTTGATTCATGAGAGGATTCTTGAGAGCGATGCTGCTTTTGGGATTGGAGAGGAGGAAGAGGACTTTGGGGGAAGGGGAGGTGGTGGGAGTAGCAGCAGAGTGGCTACTAGATTGGTGGTGTCTAGAATGCATGTGGGGTGTTTGTTGGGCAAAGGAGGGAAGATTATTGAACAAATGAGAATTGAAACCAAGACTCAGATTAGGATACTTCCTAGAGATCACAATCTTCCTCGTTGTGTTTCCATGTCGGAAGAGATTGTTCAGGTTGTAGGTGATGCAAATGCTGTAAAGAATGCTATAGTACTTATATCATCACGCTTAAGGGAAAGCCAACATCGTGACCGCAGTCACTTTCATGGACGAGCGCATTCGCCAGAGCGTTTTTTCCCTCCAGATGATGATTATGTACCTCACGGGGCAGCTCGTAGACCCACTATAGACGGGGCAACTTTTGGATCACGATTATCTTCTGCCAATATAAGAAGCAATAGCTATCCATCATTAGGTTATACAGTGGAGCCTGGGGCTCCTCCTGTAGCTGACGATGCACAACCCCTTTATGGTGAAGACCTCATTTTCCGGATACTTTGTCCATCGGACAAAGTAGATCGTATTATAGGGGAATCAGAAGGATTTGTAGAGTTCCTTCAAACTGAAGTTGGTGTCGATGTCAAGGTTGATGATCATATGGTTGGCTCTGATGAGCAGATAATCATAATTTCTTCAGACGAGGGCCCTGATGATGAGTTATTCCCAGCTCAGGAAGCTTTGTTGCATATTCAAACACGAATTGTCGATCTTGAGCTTGATGATGATAACATTATAACCACCAGGCTTGTTGTTCCATCTAGTGACATTGAATGTTTAGATGGAAGAGATGTATCACTATTAGAGATAAGTAGACTCACTGGCACAAATATTCAAATCCTCCCTAGAGAGCAGTTACCTCCCTGTGTTGAAAAAAATGATGAGCTTCTACAGATTGTAGGTGAGATCAAAGCAGCTCGAGAAGCTATTCTTGAGGTGACATCAAGACTAAAAAATCATTTGTACAGGGATTTATTTCAAAGGGACGCAGCACCATCATCTGCCTCAGTATCTAATACAGAGATATCTTCTTCCAGTAGCATAGCTCCAGTTCACGAGGCTTACACTGGTGCTGACACTCCCATAACCTATCAGAATGTGCAACCTGTGGCAGCTGCACTTCCCTTAAAAGAAACTGGAGGAGCTAGCACAGAGACAGTGAAGCTGAAAGAAGGTGATCGCCGTGATGATGTGATGAGTAGTTTGAATAGGATCCCTGTACCACTTGTCACTAGAAGTACACTTGAAGTGGTCTTACCGGAGTACGCAGTTCCAAAGCTCACAGCAAAGTCCAAAAACAAGCTTGCTCAGATAAGTGAGTTGTCAGGAGCCACTGTAACACTTGTAGAGGATAGGCCGGAGGAGACACAAAAGATTATTCGGATATCTGGTACTCCAGAGCAGGCAGAAAGAGCTCAAAGCTTGCTCCAAGGATTTATTTTGAGCACACAAGAAGATGGCCCCTAA 1953 0.4583 MERSRSKRNYYYDQQDYDSETLARTRPRYNHHYATTPHRHRGGGSGGPRPKAQDSSLTVTTSYRILCHDIKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGIGEEEEDFGGRGGGGSSSRVATRLVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDANAVKNAIVLISSRLRESQHRDRSHFHGRAHSPERFFPPDDDYVPHGAARRPTIDGATFGSRLSSANIRSNSYPSLGYTVEPGAPPVADDAQPLYGEDLIFRILCPSDKVDRIIGESEGFVEFLQTEVGVDVKVDDHMVGSDEQIIIISSDEGPDDELFPAQEALLHIQTRIVDLELDDDNIITTRLVVPSSDIECLDGRDVSLLEISRLTGTNIQILPREQLPPCVEKNDELLQIVGEIKAAREAILEVTSRLKNHLYRDLFQRDAAPSSASVSNTEISSSSSIAPVHEAYTGADTPITYQNVQPVAAALPLKETGGASTETVKLKEGDRRDDVMSSLNRIPVPLVTRSTLEVVLPEYAVPKLTAKSKNKLAQISELSGATVTLVEDRPEETQKIIRISGTPEQAERAQSLLQGFILSTQEDGP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0195 650 Gene3D K Homology domain, type 1 163 245 IPR036612 GO:0003723
Mibi05g0195 650 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 59 111 IPR036612 GO:0003723
Mibi05g0195 650 ProSiteProfiles Type-1 KH domain profile. 166 236 - -
Mibi05g0195 650 ProSiteProfiles Type-1 KH domain profile. 574 638 - -
Mibi05g0195 650 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 51 268 - -
Mibi05g0195 650 Gene3D K Homology domain, type 1 59 142 IPR036612 GO:0003723
Mibi05g0195 650 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 400 487 IPR036612 GO:0003723
Mibi05g0195 650 MobiDBLite consensus disorder prediction 1 27 - -
Mibi05g0195 650 MobiDBLite consensus disorder prediction 1 57 - -
Mibi05g0195 650 ProSiteProfiles Type-1 KH domain profile. 60 132 - -
Mibi05g0195 650 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 163 247 IPR036612 GO:0003723
Mibi05g0195 650 CDD KH-I 576 639 - -
Mibi05g0195 650 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 317 377 IPR036612 GO:0003723
Mibi05g0195 650 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 575 646 IPR036612 GO:0003723
Mibi05g0195 650 SMART kh_6 573 643 IPR004087 GO:0003676
Mibi05g0195 650 SMART kh_6 322 395 IPR004087 GO:0003676
Mibi05g0195 650 SMART kh_6 406 480 IPR004087 GO:0003676
Mibi05g0195 650 SMART kh_6 165 241 IPR004087 GO:0003676
Mibi05g0195 650 SMART kh_6 59 140 IPR004087 GO:0003676
Mibi05g0195 650 Pfam KH domain 576 639 IPR004088 GO:0003723
Mibi05g0195 650 Pfam KH domain 169 237 IPR004088 GO:0003723
Mibi05g0195 650 Pfam KH domain 63 111 IPR004088 GO:0003723
Mibi05g0195 650 CDD PCBP_like_KH 62 136 - -
Mibi05g0195 650 Gene3D - 323 484 - -
Mibi05g0195 650 Gene3D K Homology domain, type 1 573 645 IPR036612 GO:0003723
Mibi05g0195 650 ProSiteProfiles Type-1 KH domain profile. 323 390 - -
Mibi05g0195 650 CDD PCBP_like_KH 170 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0195 Mibi-ChrMibi05 1941545 1946845 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0195 05 1941545 1946845 Mibi05g0195 05 1941545 1946845 ECH