Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0192 ATGGGTGACTGGCAATCACTTATCCAATCCATTTTTCTAGGTCTCATTTTCTCCTTCCTCCTTGCCAAGCTCATATCCATCGTCGTAGCATTCAAGGACGATAATCTCACTATAACTCGCCGCATTATTAATAAAAGCGACGACCATGTAACTAATCAGAGCAAGGTAGAAACCGATGTCAGCCAATTTGCGCTCAAGCCTGATGCCGATGAAGGCGAGCATCGAGAGAATGAATCGACCTTGGCAGAGCAGGGCAGCGTGAGGAATGATAGTGTGTATGGTGATGATGATGACGACGACGATGATGATTGGGAAGGGGTGGAAAGTACAGAATTGGACGAGGCTTTTAGTGCCGCAACGGCTTTTGTGGCCGCCGCCGCCGCCGATCGGCTCTCACAGAAGGTGTCCAGTGATTCGCAGCTACAGCTATATGGGCTGTACAAAATTGCAACCGAAGGACCCTGCAGCACGCCACAGCCTTCGCCGCTGAAAATGACGGCCCGAGCAAAATGGCAAGCATGGCAGAAGTTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTATATTGATATTGTGACAGAGCTTTACCCAACCTGGTTAGATGGCTCTGCTTTGAGGAGCAAAAGTGGAGATGATGTTGGCCCAAGTTTAGGGTCTTCAGAGTCTAAGGGACCAATGGGGCCTGTATTCAGCACTTTTGTTTATGAAGAGGAAGCTGGCAGTGATTTAAAAATTGATGCAATTCATGGATTTGCCAGAGAAGGAGACTTTGCTAATCTGCTCAAGTGTATTGAAAATGGCGTTTCAGTGAATCTGAAGGACAGTGAGGGTCGGACACCATTGCATTGGGCTGTGGATCGTGGTCACCTTGAGGTCACAGAGCTGCTTGTCAGTAGGAATGCTGATGTAAATGCCAAGGATGACGATGGGCAAACTCCATTGCATTATGCTGTTGTATGTGAGAGAGAGGCCATTGCTGACCATTTGGTGAAACATAATGCGGACCCAGATTTGAAGGATAATGATGGCAGTTCGTCGCGTGAGATCTGCAGGCCAAACTGGCCTTGCATGCAACCTGTGGCAAATTAA 1092 0.4817 MGDWQSLIQSIFLGLIFSFLLAKLISIVVAFKDDNLTITRRIINKSDDHVTNQSKVETDVSQFALKPDADEGEHRENESTLAEQGSVRNDSVYGDDDDDDDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDSQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKSGDDVGPSLGSSESKGPMGPVFSTFVYEEEAGSDLKIDAIHGFAREGDFANLLKCIENGVSVNLKDSEGRTPLHWAVDRGHLEVTELLVSRNADVNAKDDDGQTPLHYAVVCEREAIADHLVKHNADPDLKDNDGSSSREICRPNWPCMQPVAN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0192 363 Gene3D - 106 216 IPR014352 -
Mibi05g0192 363 SUPERFAMILY Acyl-CoA binding protein 111 201 IPR035984 GO:0000062
Mibi05g0192 363 Gene3D - 315 352 IPR036770 -
Mibi05g0192 363 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 3 352 - -
Mibi05g0192 363 MobiDBLite consensus disorder prediction 64 105 - -
Mibi05g0192 363 PRINTS Acyl-coA-binding protein signature 158 173 IPR000582 GO:0000062
Mibi05g0192 363 PRINTS Acyl-coA-binding protein signature 135 153 IPR000582 GO:0000062
Mibi05g0192 363 PRINTS Acyl-coA-binding protein signature 179 196 IPR000582 GO:0000062
Mibi05g0192 363 Gene3D - 241 314 IPR036770 -
Mibi05g0192 363 SUPERFAMILY Ankyrin repeat 246 347 IPR036770 -
Mibi05g0192 363 PRINTS Ankyrin repeat signature 278 293 IPR002110 GO:0005515
Mibi05g0192 363 PRINTS Ankyrin repeat signature 326 340 IPR002110 GO:0005515
Mibi05g0192 363 Pfam Ankyrin repeats (3 copies) 250 341 IPR002110 GO:0005515
Mibi05g0192 363 ProSiteProfiles Ankyrin repeat region circular profile. 277 309 - -
Mibi05g0192 363 ProSiteProfiles Ankyrin repeat profile. 310 342 IPR002110 GO:0005515
Mibi05g0192 363 ProSiteProfiles Ankyrin repeat region circular profile. 310 342 - -
Mibi05g0192 363 SMART ANK_2a 310 339 IPR002110 GO:0005515
Mibi05g0192 363 SMART ANK_2a 277 306 IPR002110 GO:0005515
Mibi05g0192 363 Pfam Acyl CoA binding protein 113 193 IPR000582 GO:0000062
Mibi05g0192 363 ProSiteProfiles Ankyrin repeat profile. 277 309 IPR002110 GO:0005515
Mibi05g0192 363 MobiDBLite consensus disorder prediction 64 81 - -
Mibi05g0192 363 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 112 202 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0192 Mibi-ChrMibi05 1924764 1928238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0192 1 359 Acyl Lipid Metabolism Gene Families AT5G53470 64.444 1.80e-145 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0192 05 1924764 1928238 Mibi05g0192 05 1924764 1928238 ECH