Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0157 ATGGCCACTCCTTTCTCTACCGCCTTTCACGCCGCTTTTCTTTCCTCACCATCACCATTCTCTTCCTCTGCTTCTTCCTCCAATCTCTGTCTTCCATCTCTATCTTCTCATTTTCTGGGGCAATCCACAAAGTCTTTAGCTTTCTTTAATCCGCCTGAGATACTCAGATGCGATGTTTTTGCACAAAGAACCAGAAGAAACCGTGCTAGTTCACTCGTTGTTCGTATGTCCTGGGATGGACCCCTCGCTTCTGTCAAATTGATCACTCAGGCCAAAAATGTTGAGTTGACGGATGAGGTGAAGCAGCATGTGGAGGAGAAGGTCGGGAAGGCAGTTCATAACCATAGTCACCTTGTTAGGGAGGTGGATGTGAGGTTGTCAGTCCGAGGAGGAGGAGAATTTGGGAAAGGACCCCTCACCAAAAGATGTGAGGTAACTCTGTTCACGAAGAGGCATGGAGTGGTGAGGGCCGAGGAAGAAGCAGAGACTATGTATGGGAGTATAGATTTGGTATCATCAATCATTCAGAGAAAGCTGAGGAAGATAAAGGAAAAGGAGTCAGATCGTGGTCGTCACATGAAGGGCTTCAATAGGTTGAAGGTCAGGGAGCCTGTGACTCCTTTGCCCCTCGATGACACAGAGATGGAGACAGAGATAGACATACCTCCCCAGCAGGATGAACAATTCATTGATGAGGTTGTCCGCACAAAATACTTTGACATGCCACCACTGACTGTAAGCGAAGCAATTGAGCAGCTGGAAAATGTTGATCATGACTTCTTTGGTTTTCGAAATGAAGAAACTGGGGAGATAAATATAGTGTACAGAAGGAAGAAAGGAGGCTATGGGCTCATAATACCCAAAGGAGATGGCAAAGCGGAGCAATTGGAGCATGTGGTGGTTGAAACAGCAAGAGAATGA 921 0.4658 MATPFSTAFHAAFLSSPSPFSSSASSSNLCLPSLSSHFLGQSTKSLAFFNPPEILRCDVFAQRTRRNRASSLVVRMSWDGPLASVKLITQAKNVELTDEVKQHVEEKVGKAVHNHSHLVREVDVRLSVRGGGEFGKGPLTKRCEVTLFTKRHGVVRAEEEAETMYGSIDLVSSIIQRKLRKIKEKESDRGRHMKGFNRLKVREPVTPLPLDDTEMETEIDIPPQQDEQFIDEVVRTKYFDMPPLTVSEAIEQLENVDHDFFGFRNEETGEINIVYRRKKGGYGLIIPKGDGKAEQLEHVVVETARE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0157 306 Hamap Ribosome hibernation promoting factor [hpf]. 85 288 IPR034694 -
Mibi05g0157 306 TIGRFAM yfiA: ribosomal subunit interface protein 87 189 IPR003489 GO:0044238
Mibi05g0157 306 FunFam Ribosome-binding factor PSRP1, chloroplastic 87 190 - -
Mibi05g0157 306 Gene3D - 86 197 IPR036567 -
Mibi05g0157 306 Gene3D - 243 293 IPR038416 -
Mibi05g0157 306 PANTHER 30S RIBOSOMAL PROTEIN 71 297 - -
Mibi05g0157 306 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 87 192 IPR036567 -
Mibi05g0157 306 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 231 284 IPR032528 -
Mibi05g0157 306 FunFam ribosome-binding factor PSRP1, chloroplastic 243 294 - -
Mibi05g0157 306 CDD RaiA 86 185 IPR003489 GO:0044238
Mibi05g0157 306 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 89 185 IPR003489 GO:0044238
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0157 Mibi-ChrMibi05 1656495 1657947 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0157 05 1656495 1657947 Mibi05g0157 05 1656495 1657947 ECH