Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0150 ATGCCCTCCTCGATGCAGTCAATCCCTATCGACCGCCGTTTGGAAAAAGCTATGTCGCCAGGTCCTGTTGTTGAAGTCGCCGCCGATGAGCAGCTTCCATCGGCCGAGGAGTCTCATAATAAGAATCATGAGCACAAGGAGGACGATGCCCCTGTCGTTGAGGATGTGAAGGACGACGACAAAGACGAAGACGATGATGAGGACGACGACGACGACGACGAGGATGACAAGGAGGATGATGCTCAAGGTGCTACTGAGGGTTCAAAGCAAAGCAGAAGTGAGAAGAAGAGTCGGAAAGCCATGTTGAAGCTGGGACTGAAGCCTGTTACTGGTGTTAGCAGGGTTACTATCAAGAGAACGAAAAATATTCTATTTTTCATCTCAAAGCCTGATGTGTTCAAGAGTCCAAACTCAGAGACCTATGTCATATTTGGGGAAGCCAAAATAGAAGATTTGAGCTCACAGTTGCAGACACAAGCTGCTCAGCAGTTCAGGATGCCAGATATGGGATCAGTGGCGGCAAAACCAGATGCTGCCACGGCTGCCGCCGTGGAAGCACAGCCTGATGAGGAAGAAGAAGAGGTTGATGAAACTGGAGTCGAGCCTCGTGACATTGACTTGGTGATGACGCAGGCTGGGGTGTCCAGAAGCAAGGCCGTCAAAGCTCTCAAGACCAGCAAGGGAGACATTGTTGCAGCTATCATGGAACTTACTACTTAA 720 0.5 MPSSMQSIPIDRRLEKAMSPGPVVEVAADEQLPSAEESHNKNHEHKEDDAPVVEDVKDDDKDEDDDEDDDDDDEDDKEDDAQGATEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVAAKPDAATAAAVEAQPDEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTSKGDIVAAIMELTT 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0150 239 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 101 153 - -
Mibi05g0150 239 ProSiteProfiles NAC A/B domain profile. 91 156 IPR002715 -
Mibi05g0150 239 FunFam Putative nascent polypeptide-associated complex subunit alpha 200 237 - -
Mibi05g0150 239 Gene3D - 100 153 IPR038187 -
Mibi05g0150 239 CDD UBA_NAC_euk 202 238 - -
Mibi05g0150 239 MobiDBLite consensus disorder prediction 32 52 - -
Mibi05g0150 239 MobiDBLite consensus disorder prediction 53 81 - -
Mibi05g0150 239 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 31 238 IPR016641 GO:0005854
Mibi05g0150 239 SMART NAC_2 94 150 IPR002715 -
Mibi05g0150 239 MobiDBLite consensus disorder prediction 82 101 - -
Mibi05g0150 239 MobiDBLite consensus disorder prediction 1 103 - -
Mibi05g0150 239 MobiDBLite consensus disorder prediction 179 201 - -
Mibi05g0150 239 Pfam NAC domain 94 149 IPR002715 -
Mibi05g0150 239 Gene3D - 200 237 - -
Mibi05g0150 239 Pfam HYPK UBA domain 199 238 IPR044034 -
Mibi05g0150 239 MobiDBLite consensus disorder prediction 186 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0150 Mibi-ChrMibi05 1609950 1613879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0150 05 1609950 1613879 Mibi05g0150 05 1609950 1613879 ECH