Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2013 ATGATAGAAGAAGAAAGAGTCTTCCTTTCTACTCGAAAAATCCCAAACCTTTCAAACCCTTTCAATTTTGTCCTTCATTCTTCAGACTACAATGAACCATTGTGGAAGAACACCACCCTCACCTTCGATGATCACAAAAAATTCGCTTGTGTTTCGATGGCTGAGAGGAAATTTGATAGAGAATTCATGCCGACTTTGAATCAGCTCATGAAGAATCCACTTGCCTTCGTCTCATTTGTTCCCAAAGATGTTGCCTTGTTCTTTGCCGGAGCCATTGCTGGAGCTTCTTCCAAGATTGCCACTGCCCCTCTGGATCGTATCAAGTTCCTCATGCAGACTCATGGAGTACGAGTTGGGCGAGAAAGTGCTAAGAAGGCGTTAGGTTTCATTGAGACTATAAAAGTTATAGGGAAGGAAGAAGGCATCAAGGGTTACTGGAAGGGCAACCTCCCCCAGGTGCTTTGGATCATACCGTACAGCGCTGTCCAGCTTTTTGCCTATGAAAACTATAAGAAAATATTCAGGGGAAAGAATGCTGAGCTCTCTGTTTTTGGAAGAATTGCTGCAGGTGCTTTTGCTGGCATGACATCTACGTTTGTAGCGTATCCTTTAGATGTCTTGAGGTTACGATTAGCTGTTGAACCTGGTTATCGAACAATGACACAGGTTGCCATGGGCATGTTAAGAGATGAAGGATTTGGATCTTTCTATGTTGGGTTGGGGCCTTCTCTAATTGCAATAGCTCCTTATGTTGCTGCCAATTATTGTGTTTTTGACTTATTAAAGAGGTCTTTGCCTGAGAAATATCAGAAGAGAACTGAAATCTCACTAGTAACAGCTGCGCTTTCAGTCTCTCTTTCCACGCTGACAACATACCCTCTAGACACCATGCGAAGACAGATGCAAATTAAGGGTACGCCTTACAGGACAGTTGTTGGTGCTCTCTCAGGTATTATTGAACGGGATGGAGTTATAGGGTTGTACAGGGGTTTCGTGCCCAATGCCTTGAAAAACCTACCAACCAGCAGTATCAGGCTTACCACATATGACATTGTTCAACGCTTAATTGCGGCAAGTGAGAAAGAGTTTCAAACAATCACCGAGGAAAATCGCAAGAAACAAACAAATACCAAGACTCAATAA 1143 0.4304 MIEEERVFLSTRKIPNLSNPFNFVLHSSDYNEPLWKNTTLTFDDHKKFACVSMAERKFDREFMPTLNQLMKNPLAFVSFVPKDVALFFAGAIAGASSKIATAPLDRIKFLMQTHGVRVGRESAKKALGFIETIKVIGKEEGIKGYWKGNLPQVLWIIPYSAVQLFAYENYKKIFRGKNAELSVFGRIAAGAFAGMTSTFVAYPLDVLRLRLAVEPGYRTMTQVAMGMLRDEGFGSFYVGLGPSLIAIAPYVAANYCVFDLLKRSLPEKYQKRTEISLVTAALSVSLSTLTTYPLDTMRRQMQIKGTPYRTVVGALSGIIERDGVIGLYRGFVPNALKNLPTSSIRLTTYDIVQRLIAASEKEFQTITEENRKKQTNTKTQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2013 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 355 IPR018108 -
Mibi04g2013 380 PANTHER SOLUTE CARRIER FAMILY 25 72 356 - -
Mibi04g2013 380 SUPERFAMILY Mitochondrial carrier 84 351 IPR023395 -
Mibi04g2013 380 FunFam Envelope ADP,ATP carrier protein 83 361 - -
Mibi04g2013 380 Gene3D Mitochondrial carrier domain 83 356 IPR023395 -
Mibi04g2013 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 81 173 IPR018108 -
Mibi04g2013 380 Pfam Mitochondrial carrier protein 180 267 IPR018108 -
Mibi04g2013 380 Pfam Mitochondrial carrier protein 86 177 IPR018108 -
Mibi04g2013 380 Pfam Mitochondrial carrier protein 276 357 IPR018108 -
Mibi04g2013 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 264 IPR018108 -
Mibi04g2013 380 PRINTS Mitochondrial carrier protein signature 99 113 IPR002067 GO:0055085
Mibi04g2013 380 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Mibi04g2013 380 PRINTS Mitochondrial carrier protein signature 86 99 IPR002067 GO:0055085
Mibi04g2013 380 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Mibi04g2013 380 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Mibi04g2013 380 PRINTS Mitochondrial carrier protein signature 280 302 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2013 Mibi-ChrMibi04 51183191 51187393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2013 2 373 Organic Solute Cotransporters AT3G51870 60.422 3.29e-168 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g2013 04 51183191 51187393 Mibi11g0205 11 3094687 3104423 CCT