Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1129 ATGAAACGCGCACACGCGAAAGGCAGATGCATCCAAAAAACGAAATCTGTATCTCATACATTAGACTTCGCTCTACTTCCTGATTTATTCATCAATTTCTCTGTGACGGAAGCGTTGCTTAAGTTTGGGAAAATGGGTTTATTTTCTGGGCTCTTTTTGGGGATAGCACTTGGCATCGCTTTGATGTATGGATGGCAATATATGATGAAGTATCGAAGCGCCAAGCGGATTGCGAAGGCAGTTGATATCAAACTCCTTGGATCCCTTGACAGAGATGATATACGAAAAATCTGTGGTGATAATTCTCCTGAGTGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTAAACAAGCAGCTGAGCAAACTGTGGCCATCTGTGGCAGAAGCTGGATCAATGGTGATCAAAGAATCTGTTGAACCACTACTTGAGGAGTATAGACCTCCCGGAATTACTTCATTGAAATTCAGCAAGCTGTCACTTGGAAATGTTGCTCCAAAGATTGAGGGTATTCGTGTTCAGAGTCTTAAGAAAGGACAAATCATAATGGACATTGATTTAAGGTGGGGTGGTGATCCCAGCATTATTTTGGCTGTTGAAGCAGCCCTTGTTGCATCAATCCCCATTCAGTTGAAAGATCTCCAAGTTTTCACGATTATCCGTGTTATCTTCCAACTTGCTGAAGAGATACCCTGTATTTCTGCTGTTGTTGTTGCCCTGCTTGCTGAGCCAAAACCTCGGATTGATTACACTCTTAAGGCCATTGGAGGAAGTTTGACGGCTATTCCTGGACTATCAGATATGATTGATGATACCGTGCACTCAATCGTTACTGATATGCTTCAATGGCCTCATAGAATCGTTGTTCCACTTGGTGGTGTACCTGTTGATACTAGTGAACTGGAGCTTAAACCACAGGGAAATCTCACAGTGAATATTTTGAAAGCCAATGATTTGAAGAATATGGAGATGATTGGGAAATCTGATCCATATGTAGTTGTGCATATTCGACCTTTATTTAAGGTTAAAACAAAGGTTATTGACAACAACCTGAATCCTGTTTGGGATCAGACATTTAACTTGATTGTTGAAGACAAAGAGACTCAGTCACTCATTCTAGAGGTTTTTGATAAAGATATTGGGCAAGATAAGAGATTGGGGATAGTAAAATTACCCCTTATTGATATCGAAGCAGAAACTGAAAAGGAAATTGAGTTGAGGCTGTTGCCATCGCTGGACACACTTAAGGTAAAAGATAAGAAGGACAGGGGATCATTGACAATTAAGGTCTTATACCATCAATATAATAAAGAAGAGCAGTTTGAGGCTTTAGAAGCAGAGAAGAAGATACTAGAAGAAAGGAAGAAGCTGAAAGAAGCAGGAGTTATAGGAAGTACCATGGATGCCATAGATGGAGCAGCATCAATTGTTGGCTCTGGTGTAGGAATGGTTGGTACTGGTGTTCTTGCTGGTGCTGGCCTTGTCGGAAGCGGTATTGGTGCTGGAGCCGGGCTTGTTGGTAGTGGTGTTGGTGCTGGGGTCGGTCTTGTCGGTAGTGGTCTTGGAGCTGTTGGCAGCGGATTGAGCAGGGCGGGGAAGTTCATGGGCCGGACTATCACGGGAGGGCATAGCAGTGCAAGGAGGAGTGGCACAACTACTCCGGTCAATAATGCTCAGGAAAGTGGTGGTGGTGCAAAGCCCCTGTGA 1710 0.4327 MKRAHAKGRCIQKTKSVSHTLDFALLPDLFINFSVTEALLKFGKMGLFSGLFLGIALGIALMYGWQYMMKYRSAKRIAKAVDIKLLGSLDRDDIRKICGDNSPEWISFPVYEQVKWLNKQLSKLWPSVAEAGSMVIKESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLKKGQIIMDIDLRWGGDPSIILAVEAALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAIGGSLTAIPGLSDMIDDTVHSIVTDMLQWPHRIVVPLGGVPVDTSELELKPQGNLTVNILKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVIDNNLNPVWDQTFNLIVEDKETQSLILEVFDKDIGQDKRLGIVKLPLIDIEAETEKEIELRLLPSLDTLKVKDKKDRGSLTIKVLYHQYNKEEQFEALEAEKKILEERKKLKEAGVIGSTMDAIDGAASIVGSGVGMVGTGVLAGAGLVGSGIGAGAGLVGSGVGAGVGLVGSGLGAVGSGLSRAGKFMGRTITGGHSSARRSGTTTPVNNAQESGGGAKPL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1129 569 Gene3D C2 domain 303 461 IPR035892 -
Mibi04g1129 569 Coils Coil 435 462 - -
Mibi04g1129 569 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 112 292 IPR039010 -
Mibi04g1129 569 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 45 469 IPR045050 GO:0008289
Mibi04g1129 569 FunFam synaptotagmin-4 isoform X1 303 461 - -
Mibi04g1129 569 ProSiteProfiles C2 domain profile. 291 409 IPR000008 -
Mibi04g1129 569 MobiDBLite consensus disorder prediction 539 569 - -
Mibi04g1129 569 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 110 293 IPR031468 GO:0008289
Mibi04g1129 569 PRINTS C2 domain signature 325 337 IPR000008 -
Mibi04g1129 569 PRINTS C2 domain signature 372 380 IPR000008 -
Mibi04g1129 569 PRINTS C2 domain signature 350 363 IPR000008 -
Mibi04g1129 569 Pfam C2 domain 308 404 IPR000008 -
Mibi04g1129 569 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 308 435 IPR035892 -
Mibi04g1129 569 CDD C2 310 404 - -
Mibi04g1129 569 MobiDBLite consensus disorder prediction 543 561 - -
Mibi04g1129 569 SMART C2_3c 309 406 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1129 Mibi-ChrMibi04 24507086 24517880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1129 310 400 Lipid Metabolism Gene Families AT4G00700 38.462 2.88e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g1129 04 24507086 24517880 Mibi04g1129 04 24507086 24517880 ECH