Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0845 ATGGGGGGAGCTTGTTCTAGGAAGCGAGATCAGGACAGTGAAGATGGTTCTCATAGAAGACTTTCACATAGATATTGCAAAAGTGGGAGTTTGAAATGGTTGAATTCATCATTTTCTTATCCTTCTATAGATTACCATTCACAGAAAGGAGAATGCCCATCATTGTTGGACTTGTGTGTCCGGAAAACATGCGAGGAGATTCATAATTATAGCACATTTTCTTCAATCCCACGGGACATAAGTCAGCAAATTCTTAATGAATTGGTTTATTCCCAACGTCTAACTGGCATTTCTTTCAAAGCTTTTCAAGATTGTTCTCTCCAGGATTTCTACTTGGGAGAATATCCTGGTGTGAATGACAGTTGGATGCAAATTATCTCATCGCAAGGGTCATCTGTCCTATCTGTGGATCTTTCTGGGTTTGATGTCACTGATTATGGGCTGACTTATCTCAAAGATTGCACAAATCTTTTAACTTTGAATCTTAATCACTGTGACCAGATTTCTGACCATGGCCTGGAGTATATCAATGGTATGTCAAACTTGACAAGTTTGAGTTTTAAAAGAAACAGTGCCATTTCTGCACAAGGAATAAGTTCATTTTCTGCTCTTGTTAACTTGGCTAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGGGGCCTTGTTCATCTTCAAGGTTTAACCAAGCTGGAATCTCTAAATATGAAGTGGTGCAATTGCATAACAGATGCTGACATGAAGCCTTTGTCAGAGCTTACAAACATGAAGAGTCTAGAGATTTCATGCAGTAAAGTGACAGATTTTGGCATCACTTTCTTGAAAGGATTACAAAAGCTTGCTCTGTTAAATCTGGAAGGATGCCTTGTTACAGCTGCATGCTTGGATTCTCTAGCAGAACTTCCTGCCCTGTCAAACTTGAATCTCAATAGATGTAATCTTTCAGATGATGGATGTGAAAAGTTTTCACGGATGCAGAATTTGAAAGTGCTAAACTTGGGATTCAATGATATAACAGACGCATGTTTAGCATACTTAAAAGGATTGACAAAATTAGAGAGCTTGAATCTTGATTCATGTAGGATTGGTGATGATGGATTGATTAATCTGGCAGGCCTTCGGCAGTTGAAATGCTTGGAATTGTCTGATACGGAAGTTGGTAGCAGCGGGCTCCACCACATATCAGGATTGTCTAGTCTGGAGAAGATAAACTTGTCATTCACCATGGTTAGTGATGGTGGTTTAAGGAAATTGTCTGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTCGCCAAATTACTGATTCAGGACTACAAGCTCTTACAAGTTTGACTGGGCTTACTGACCTGGATTTGTTTTGTGCACGAATCACTGATTCTGGAACAAGCTACTTGAAAAACTTAAAGAATCTGAGGTCGCTGGAAATATGTGGTGGAGGATTGACTGATGATGGTGTCAAAAATATCAAAGAGCTTTCATCTCTGATGTGCTTAAATTTATCACAGAACTGCAGTCTTACGGACAAATCCCTGGAATTAATCTCTGGGCTCCCTAAGCTGATCTCTTTGAACGTTTCCAATTCTAACATCACCAAAGCGGGTCTGCAGCATCTGAAAACGCTCAAAAACTTGAGATCTCTAACATTGGAGTCCTGCAAGGTGACAGCAAATGACATTAGGAAACTTAAAGCAGACCTTCCTAATCTGGTTAACTTTCGGCCAGAATAG 1731 0.3992 MGGACSRKRDQDSEDGSHRRLSHRYCKSGSLKWLNSSFSYPSIDYHSQKGECPSLLDLCVRKTCEEIHNYSTFSSIPRDISQQILNELVYSQRLTGISFKAFQDCSLQDFYLGEYPGVNDSWMQIISSQGSSVLSVDLSGFDVTDYGLTYLKDCTNLLTLNLNHCDQISDHGLEYINGMSNLTSLSFKRNSAISAQGISSFSALVNLAKLDLERCPGIHGGLVHLQGLTKLESLNMKWCNCITDADMKPLSELTNMKSLEISCSKVTDFGITFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDDGCEKFSRMQNLKVLNLGFNDITDACLAYLKGLTKLESLNLDSCRIGDDGLINLAGLRQLKCLELSDTEVGSSGLHHISGLSSLEKINLSFTMVSDGGLRKLSGLSSLKSLNLDARQITDSGLQALTSLTGLTDLDLFCARITDSGTSYLKNLKNLRSLEICGGGLTDDGVKNIKELSSLMCLNLSQNCSLTDKSLELISGLPKLISLNVSNSNITKAGLQHLKTLKNLRSLTLESCKVTANDIRKLKADLPNLVNFRPE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0845 576 SUPERFAMILY RNI-like 273 571 - -
Mibi04g0845 576 Gene3D Ribonuclease Inhibitor 400 479 IPR032675 -
Mibi04g0845 576 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Mibi04g0845 576 Gene3D Ribonuclease Inhibitor 220 301 IPR032675 -
Mibi04g0845 576 Gene3D Ribonuclease Inhibitor 86 219 IPR032675 -
Mibi04g0845 576 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Mibi04g0845 576 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Mibi04g0845 576 SUPERFAMILY RNI-like 85 366 - -
Mibi04g0845 576 Gene3D Ribonuclease Inhibitor 302 399 IPR032675 -
Mibi04g0845 576 FunFam F-box/LRR-repeat protein 14 299 382 - -
Mibi04g0845 576 PANTHER UNCHARACTERIZED 326 477 - -
Mibi04g0845 576 FunFam Leucine-rich repeat family protein 220 298 - -
Mibi04g0845 576 FunFam Predicted protein 118 219 - -
Mibi04g0845 576 SMART LRR_RI_2 397 423 - -
Mibi04g0845 576 SMART LRR_RI_2 349 375 - -
Mibi04g0845 576 SMART LRR_RI_2 301 330 - -
Mibi04g0845 576 SMART LRR_RI_2 542 569 - -
Mibi04g0845 576 SMART LRR_CC_2 349 373 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 469 493 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 179 204 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 421 445 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 518 542 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 228 253 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 154 178 IPR006553 -
Mibi04g0845 576 SMART LRR_CC_2 301 325 IPR006553 -
Mibi04g0845 576 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Mibi04g0845 576 Pfam Leucine Rich repeat 154 176 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0845 Mibi-ChrMibi04 17253106 17260685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0845 277 504 Receptor kinase-like Gene Family AT1G75820 27.074 4.10e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0845 04 17253106 17260685 Mibi04g0845 04 17253106 17260685 ECH