Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0838 ATGGCGCCGAGGTCTGCAAGGGGGAAATCGAATAAAGCCAAGGCAGAGAAGAAGAAGAAGGAAGAGAAAGCTTCAGTGCCTTCTCTGGTTGACATCAATGTCATTACTCCTTATGATTCTCAAGTTGTTCTCAAGGGTATCTCTACTGATAAGATTCTTGATGTGAGAAGGCTATTAGCTGTAAATGTGGAAACCTGCCATTTTACTAACTATTCTCTCTCTCATGAGGTTAAAGGGCAGAGATTAAATGACAGAGTTGAGGTTGTTACTCTAAAGCCATGTATTCTAAAAATGGTTGACGAGGATTACATAAAGGAAGCCCAAGCGATTGCACATGTGAGGCGACTATTGGACATTGTGGCCTGCACAACCAGGTTTGCGAAGGCTAGACGGGCCTTAACAAGCCCAGATTCCAAAGCTAAGAAGACTAGCAAGGCCCAAAATAACCAGAAGCGGAATCCAAGCCCACCAAGTACGCCCAATGGGGAAAACCGGGTCGGGTCGCCGTCGGCCGTATCACCAATTTCCGATAATTTAGGAATGGTAGCCATTCATGCGACGCCGAAGCTATCAGATTTCTATGAGTTCTTCTCTTTCTCTCATCTCTCTCCTCCTATTTTACACTTGAAGAGATGTGAACTGAAGAATGGGGATGATAGACGCAAAGGAGATTACTTTCAGCTTCAGATTAAAATCAGCAACGGGAAGCTGGTAGAAGTGGTTGCATCAGAAAAAGGCTTTTATACAGTGGGGAAGCAGTCTCTTCAGAGCCATTCTTTAGTGGATCTTCTGAAACAACTCAGCCGAGGTTTTGCTAATGCATATGAATCTTTGATGAAAGCGTTTGTGGAACATAATAAGTTTGGTAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTTGCCGAGAGTCCTTCAAATTTTCCTGCTCTACCTATTGAGGATGAAAGCTGGGGTGGTAATGGCGGTGGCCAGGGAAGAAATGGTGAATACAATCATAGACCATGGGCTAAAGACTTCGCGATTTTGGCTTCTCTTCCTTGCAAAACTGAAGAGGAGAGGGTGGTCAGAGACAGAAAAGCTTTTCTGCTTCATGGTCAATTTGTTGATACCTCAATATTTAATGCTGTTGCAGCTATAAGGCGTGTCATAGAGTCAAAGTCCAATGGAAATAATAAACAGCATTGTACTCTGGATTCATTCCTGCATGAAGATCGTGTAGGTGACTTGTCCATAGTCGTCAAACGTGATATCGGAGACACAAACCATAAGGATGATAAGAAGCTTTCCAGTGGTGAATCCAAAGTGTTTAAGGAGTATGCTCTGAAGAATTTACTCAAAGGATTGACTGCAGATGAAAGTGTAATTGTCCGTGATACTTCTTCCTTGGCTGTTGTCATTGTACGCTACAGTGGATATGTTGCAACAGTAAGTGTGGTGGGTAAGGGTAACATTAACACAAGGAAGCTTGAATTTCAAGATATTGAAATTGATGATCAACCAGATGGAGGGGCAAATGCTCTCAATGTCAATAGTTTGAGGCAACTGCTTCACAAGTTTGGAGCTGAGCCATCCGAAGGGAAATCATCAGCAGCAACTTTGGATGATTCAGACTCTTATAGAAATCTTGTACGGCAAGTGGTCAAAGAAAGCTTGACAAAGAAAAGTGAGGAGCTAGTTAATTCAGAAAGGTCTATTCGGTGGGAACTTGGTTCTTGTTGGGTGCAACATTTGCAGAAGCAAGAAACTTCAACAGATAAAAGTTCCGAAAAAAAGGAAGATGGCAATGAAGCAGTACAAGCTGTCAAAGGTCTTGGAAAGCAATTCAAATTTTTGAAGAGGAGGGAAAAGAAGCCAACTAGTTTGGATTGTACAGACCATAAAGAGCAAAATGACCATAGACCTTTAGATGCGGAAACTGATAAAGCTGAATTAAACAATGATGACTTAAATGGCTCTGCTGAATTGGAGAAACTTCTATCAGAAGAAGCATTTTTGCGACTGAGAGAATCTGGAACAGGTCTACATATAAAGACAGTTGATGAGCTTATCAACATGGCACACAAGTACTATGACGAAGTTGCCTTGCCAAAGCTGGTTACAGACTTTGGATCACTTGAACTTTCTCCAGTTGATGGCCGCACGCTAACTGATTTCATGCATCTAAGAGGATTAAAAATGCACTCCCTTGGTGAAGTAGTTAAACTTGCAGAAAGTCTTCCACACATTCAATCTCTTTGTATTCATGAGATGGTTACTCGAGCTTTCAAGCATTTGCTCAAAGCCGTAATTGCTTCAGTGGATGATGTAGCAGACTTATCTCCCGTCATTGCATCAACTCTGAATTTCTTACTTGGAAACTGTCAATTGGAAAATACTGACCGAGATTTGACTGAAGACAATAATCTCAGATTGCAGTGGTTACGAGCATATTTAATAAAAAAATTTGGATGGACATTAAATGATGAATTTCAACATTTGAGGAAGTTATCAATCCTGAGAGGGCTTTGTCATAAGGTTGGATTGGAATTGTTCCCAAGAGATTATGACATGGAGACCTCCCACCCATTTGGGAAATGTGATATTATCGGCCTAGTTCCGGTTTGCAAGTACATAGGATGCTCCTCAGCAGATGGACGCAATTTATTGGAAGCATCCAAAATGGCTCTTGATAAAGGAAAGCTTGAGGATGCAGTAAATTATGGAACAAAGGCATTGGCAAAAATGATGGCTGTTTGTGGTCCCTATCATCGAACTACTGCAAGTGCTTATAGTCTTCTAGCTGTTGTTCTCTACCACACTGGAGATTTTAATCAGGCAACCATATATCAGCAAAAGGCCCTGGATATAAATGAGAGGGAGTTTGGGCTTGACCATCCAGACACAATGAAAAGCTATGGGGATCTCTCTGTCTTTTATTATCGCCTGCAACACATGGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTCTTCCTTCTTCACTTCACATGTGGGCTGTCTCATCCGAACACAGCGGCAACATATATAAATGTGGCTATGATGGAAGAAGGTATGGGAAATGTTCACGTGGCGCTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGAAGATCATATCCAGACTGCTGCGAGCTTCCATGCCATTGCCATAGCTCTTTCTTTGATGGAAGCATATTCCCTGAGTGTACAACATGAACAAACGACCCTTAAGATACTTCAAGAAAAGCTTGGACCTGAAGATCTTCGTACACAGGATGCTGCTGCATGGCTCGACTATTTTGAATCAAAGGCAATAGAGCAACAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGTGTATCAGATCTCCTGGATTTTATTAATCCTGAACAAGAGTTAAAAGGAAATGACACTCAGAGGAAACAACGGCGTGCAAAGATACACCCAATAGTTGATAAAAACCATCAAGAACATGAAGATTCGATAGCTGATGAGAACATTCCCTTAGAAGGATCAAAAGATGATAAAAGTATGGAAGAAGCCATCACTCAAGAAACAATAGTCATGCTTCATTCTGAAGAAGTGAAAGATAATGGTGAGTTCATTAGGTATGTCCCTGAGACAAGTGAAGTTGTTGAGGAAATATCCTCTGATGAAGGGTGGCAAGAAGCCAGTTCTAAAGGGCGGTCAGGAAACACAGCCAACCGCAAGTTTGGTCGTAAGAGACCTCTTCTTGCAAAGCTGAGGATTAATAGCTCTGAGAATTACATCGCCAGAGAAAATAGTCACATTACGTCACCACATAAAGGAAATCCAAAAGTCACTTCAGCCACACTTTCTTCTCCTGGACAATCAAAAGCTAGAAGCTCCACTGTAAAAGAGGAATCTGTCAATCACTCAACAAGAGCTTCAGTGTCCAAAACTTCATCTATTCCAGCAGCTCTTAGTCCTTTGGCTTCAAAGTCTATATCTTACAAAGAAGTGGCTCTGGCACCACCAGGTACTGTTCTAAAGCCCCTGTTGGAGAAAGCTGAAGTGGACAATGTGAAGACTGAAAGTGAGAAGTGCAATGCAGCTGAAGAAAGCTGCCAAAGTGCAGTTTCTAAGCAAGATAAAAAGGAGGAGACTTGTGAAGCTGACATGAAAAGAGAAAATTCTGGTTCAGAACTTGAAGAGGGGTCCCTCTCTTCTGATCAGGAAAAACCTGCAGAAACCAATGGTAGTAAGCTTTCGGCCTCTGCAGAACCATTCAACCCAGGGATGTTGTTTATGCCTCACCACATAAATTCGGTTCCCATCACAAACATGTATGAAACAAATGCTAGTCAAGGCATGCTTACAGATCCTGTGCTTCCTCCTCCTGTTGCTGCTAGGGTCCCCTGTGGGCCTAGATCACCTCTATACTATAGAACCAACTATACATTTCGCATGAAACATGGTTATTCAAAAAATCACACCCCCATCAGGGAAAGAAGTGGAATTTTGGCTCCAAGAATTATGAATCCAGATGCACCTGAGTTTGTCCCCAGAAAAGCTCTGCAAACGGAGGAGACCAATGAAACAAGTGTGGGAGAAAACAACAATCTAGACGAAGAAACCAAAAAGGCTTTGAAAGGAAGTTCCACAAGAAAGAGTGCTTCTGGATCTGAGAAGTCAGAGCTTGCTAGGCAGATATTGATTGGCTTGCTTGTGAAATCAGCTCAGAAAAATACTGATTATGCTGATGATCAATCCAAAGTCAATGAAGAAGAAAAAGGTGAGAAAGTGGAAAATTCTTCTGATGCAATAGCCAAAGACAGGGCTATTATAAAAATCCTATATACCAATGAAGAAAAAAATAAGATGAATCCCCAATCAAATGAAAGCGAAGAGGAAGAAAAAGTAGATGCAGACAATAAAAACAATGGAGATGAAGGGTTTATAGTTGTGACTAAGAAAAAGAAGAGCAGGCAGAAGTTCACAAATGGAGTATCAGATTTGTGCAATAATCAGCAATCCATCTGTGCTTCAGTTCGTTGA 5058 0.4162 MAPRSARGKSNKAKAEKKKKEEKASVPSLVDINVITPYDSQVVLKGISTDKILDVRRLLAVNVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCILKMVDEDYIKEAQAIAHVRRLLDIVACTTRFAKARRALTSPDSKAKKTSKAQNNQKRNPSPPSTPNGENRVGSPSAVSPISDNLGMVAIHATPKLSDFYEFFSFSHLSPPILHLKRCELKNGDDRRKGDYFQLQIKISNGKLVEVVASEKGFYTVGKQSLQSHSLVDLLKQLSRGFANAYESLMKAFVEHNKFGNLPYGFRANTWLVPPSVAESPSNFPALPIEDESWGGNGGGQGRNGEYNHRPWAKDFAILASLPCKTEEERVVRDRKAFLLHGQFVDTSIFNAVAAIRRVIESKSNGNNKQHCTLDSFLHEDRVGDLSIVVKRDIGDTNHKDDKKLSSGESKVFKEYALKNLLKGLTADESVIVRDTSSLAVVIVRYSGYVATVSVVGKGNINTRKLEFQDIEIDDQPDGGANALNVNSLRQLLHKFGAEPSEGKSSAATLDDSDSYRNLVRQVVKESLTKKSEELVNSERSIRWELGSCWVQHLQKQETSTDKSSEKKEDGNEAVQAVKGLGKQFKFLKRREKKPTSLDCTDHKEQNDHRPLDAETDKAELNNDDLNGSAELEKLLSEEAFLRLRESGTGLHIKTVDELINMAHKYYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMHSLGEVVKLAESLPHIQSLCIHEMVTRAFKHLLKAVIASVDDVADLSPVIASTLNFLLGNCQLENTDRDLTEDNNLRLQWLRAYLIKKFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMETSHPFGKCDIIGLVPVCKYIGCSSADGRNLLEASKMALDKGKLEDAVNYGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINEREFGLDHPDTMKSYGDLSVFYYRLQHMELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILQEKLGPEDLRTQDAAAWLDYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFINPEQELKGNDTQRKQRRAKIHPIVDKNHQEHEDSIADENIPLEGSKDDKSMEEAITQETIVMLHSEEVKDNGEFIRYVPETSEVVEEISSDEGWQEASSKGRSGNTANRKFGRKRPLLAKLRINSSENYIARENSHITSPHKGNPKVTSATLSSPGQSKARSSTVKEESVNHSTRASVSKTSSIPAALSPLASKSISYKEVALAPPGTVLKPLLEKAEVDNVKTESEKCNAAEESCQSAVSKQDKKEETCEADMKRENSGSELEEGSLSSDQEKPAETNGSKLSASAEPFNPGMLFMPHHINSVPITNMYETNASQGMLTDPVLPPPVAARVPCGPRSPLYYRTNYTFRMKHGYSKNHTPIRERSGILAPRIMNPDAPEFVPRKALQTEETNETSVGENNNLDEETKKALKGSSTRKSASGSEKSELARQILIGLLVKSAQKNTDYADDQSKVNEEEKGEKVENSSDAIAKDRAIIKILYTNEEKNKMNPQSNESEEEEKVDADNKNNGDEGFIVVTKKKKSRQKFTNGVSDLCNNQQSICASVR 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1412 1426 - -
Mibi04g0838 1685 ProSiteProfiles Clueless (Clu) domain profile. 319 594 IPR025697 -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1228 1253 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1584 1605 - -
Mibi04g0838 1685 Gene3D Tetratricopeptide repeat domain 1001 1119 IPR011990 GO:0005515
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1366 1427 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1629 1654 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1588 1605 - -
Mibi04g0838 1685 SUPERFAMILY TPR-like 887 995 IPR011990 GO:0005515
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1232 1246 - -
Mibi04g0838 1685 CDD CLU-central 715 856 IPR033646 -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1525 1565 - -
Mibi04g0838 1685 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 881 1131 - -
Mibi04g0838 1685 SMART tpr_5 1010 1043 IPR019734 GO:0005515
Mibi04g0838 1685 SMART tpr_5 968 1001 IPR019734 GO:0005515
Mibi04g0838 1685 SMART tpr_5 926 959 IPR019734 GO:0005515
Mibi04g0838 1685 ProSiteProfiles TPR repeat profile. 926 959 IPR019734 GO:0005515
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1622 1654 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1 23 - -
Mibi04g0838 1685 Pfam Tetratricopeptide repeat 1009 1083 - -
Mibi04g0838 1685 Pfam Tetratricopeptide repeat 925 995 - -
Mibi04g0838 1685 SUPERFAMILY TPR-like 963 1087 IPR011990 GO:0005515
Mibi04g0838 1685 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Mibi04g0838 1685 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 9 1412 IPR027523 GO:0006996
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1379 1411 - -
Mibi04g0838 1685 Pfam Translation initiation factor eIF3 subunit 135 713 855 IPR033646 -
Mibi04g0838 1685 Gene3D Tetratricopeptide repeat domain 886 1000 IPR011990 GO:0005515
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 1273 1322 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 139 171 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 133 171 - -
Mibi04g0838 1685 MobiDBLite consensus disorder prediction 625 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0838 Mibi-ChrMibi04 17030444 17043922 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0838 04 17030444 17043922 Mibi04g0838 04 17030444 17043922 ECH