Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0677 ATGTTTAAATCCTTTCCCGCGCCGATCCTAGCGGGAAATCTCTTTCGCTCCGCCTTTGATGCGTCCACAAACAATGGCGGCAAGGTAATCATCCATAAAAGAAGCTCACTTCACAGCCATAGTTACATTTCAAGCAAACGTGAAATTGAAAGAAAAATGGATGCCAGTGAAGGAAGTAAACATGATTCAAAATTCCCCGCTTTTCCCTTTAAACCCTACTCAATCCAGATCGACTTCATGAATGCCCTCTATCAGTTTCTTGATCAAGGTGGCGTTTCCATGCTCGAAAGCCCCACTGGTACTGGGAAGACTATGAGTGTTATCTGTAGTGCTTTGCAATGGGTGCTTGATCAGAGGCAACAGAAGAAATCAGAAAAGGCAGGTCATGGCGGGGGTTCAGATGATGAACCTGATTGGATGAGAGACTTTGTTGTGGACAAAGAAAAGGAAGTCTCATCTGAAAGAATAAGCAAGAAGAAGTTAGGGTCTAGATTAGGTAAGCCTGATAAGAAGAATAACCGGGAACTTTGTAAAGATTTGCAGGTTAAAAGTGAAAATTCTGCTCCTGAAAAGGGGCATGATAATTTTCATAAGAAAATTGATAGAGGGGACGTGGATGTTGTTGATGAGGAATTCTTACTTGAGGAATATGAAAGTGAAGATGAAGGAGCTGCGGATGATATAAAGTCAAAGAGGAAGGCTTCTAAAAGTGGTTTTTCTTCGTCCAGTGAAGAATCAGAGGAGGAGGAGGAGGAGGAAAAGAAGTTGAAGATTTTTTTCTGTAGTCGAACTCATTCACAGCTATCACAGTTCATAAAGGAATTAAGGAAAACAGTCTTTGCTGATGAGATGGACGTTGTTTCTTTAGGCTCCAGGAAAAATCTTTGCATTAACGAAGAAGTACGTAAACTTGGTAACACCACACGCATAAATGAGCGATGCTTGGAGCTCCAGAAGAAAAAGAACAATGAACCAGCGAAAGTTAAGAACTTAAGAGCATGCACAGGAGTACGGAGAACAAAGGCAATGTCTGGTTGCCCAATGCTTAGAAAGCATAGACTACAAAGAGAATTCAGGGATGAGGTATCCCAGAGTGGGGCCTTGGACATTGAAGATCTTGCAAACTTGGGAAGGAATTTGGGAACTTGCCCTTATTATGGTTCTAGAAGCATGGTTGTGAAAGCTGATCTTGTGGTTCTACCATATCAGTCTCTTCTGTCAAAATCATCCCGTGAAGCACTTGGTTTGAATTTGAAATCAAATATTGTCATTATAGATGAAGCTCATAATTTAGCTGATTCACTCATTAGCATGCATGACTCCAGAATTACTTTAGCACAGCTGGAAAATGTGCATTCCCATTTGAATAGATACTTTGACAGATTCTGTAATCTTCTGGGACCTGTTAATCGGAGATATATTCAAACTATGATGGTCCTCACTCGAGCTTTCCTGCGAGTGCTAACAAATGAGAAGGATGCAAATCTCATAAGTTCTTGCCAACATATAGAAAAGGCTTTTCAGGAAAGTAGGCAGTCTGAATTTACCATGTCCGTCAATGATTTTACCTTTGAACTAAATGTAGACAATGTCAACATGATTAAGTTGGTGAAGTATATCAAGGAAAGCAAGATCATGCACAAGGTTTCTGGTTATGGAGAAAAGGTAGCCAACTTGGAGAAGATTTCAGTTACCACTAAACTTGAACATTATGAAGATGGAAGCACCCTGTCTGCGTTCCAGGCATTAGCTGACTTGTTGCTGTCACTGACAAATAATGACAATGATGGAAGGATAATCATTTCCAGGTCTAGAACAACGGGGCCCAGGAAACAAGGAGGGTATATTAAATATGTAATGCTCAGTGGAGAGAAGATATTTTCTGAGATCGTGGACCAAGCACATGCTGTTCTATTAGTAGGGGGAACTCTACAACCTATTGAAGAAACACGAGAGCGACTCTTTCCGTGGTTACCACCAAACCAGTTGCATTTCTTTTCATGCGGTCACATTGTCTCTCCTCAGAGTATTATGCCAATTGCAGTCTCCCGTGGCCCTTCTGGCCGCTCCTTTGATTTTAGCTATAGCTCAAGGAGCTCACCTGATACTATGCAGGAGCTGGGTCTTCTCCTCTGTAATTTGGTAACCATAGTTCCTGAAGGAATTGTTGTTTTCTTCTCATCTTTCGATTATGAAGCAAAAGTCTATGAGGCCTGGGAATCTTCTGGCATCCTGGATAGAATTACAAAGAAGAAGCGTATATTTAGAGAGCCTAGGAATAACACAGATATTGAATCTGTTCTTAAAGAATATAAAGAAACAGTTTACCCATCATCAAGTATAAATTCAAATGGAAACCCAGCATCCCAGGGTGGTGCAGTGCTTCTGGCAGTTGTTGGTGGAAAGATATCCGAAGGGATTAACTTAAGTGATGGGATGGGGCGGTGCATAGTCATGGTTGGTCTGCCATATCCTAGCCCATCTGACATTGAGTTGCTGGAGAGGATAAAGCACATTGAAGGTTTTCGAAATTCAAACCCTGTTGAAGCTTCTACATTTTCCACCAGTTATAATGTTTATAGTGGAGATATACAAGGTGGTTTTGATATCTTAAGAAGTTGCAGTCACAGAGGAAAGGAATATTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATAAATGACTATGCAGCAATTTTGTTGGTTGACACGAGGTATGCATCTGATTCCTCAAAGAGGAGTTTTTCTCATCCAGTCAACAAGCTCCCACAGTGGATAAAGGATCGATTAGTTTCGTCAACCAATAACTATGGTGAAGTCCATAGGTTGCTGCATCAGTTTTTTAAGTTGAACAAAAGGGTTTCTCAATAG 2895 0.4086 MFKSFPAPILAGNLFRSAFDASTNNGGKVIIHKRSSLHSHSYISSKREIERKMDASEGSKHDSKFPAFPFKPYSIQIDFMNALYQFLDQGGVSMLESPTGTGKTMSVICSALQWVLDQRQQKKSEKAGHGGGSDDEPDWMRDFVVDKEKEVSSERISKKKLGSRLGKPDKKNNRELCKDLQVKSENSAPEKGHDNFHKKIDRGDVDVVDEEFLLEEYESEDEGAADDIKSKRKASKSGFSSSSEESEEEEEEEKKLKIFFCSRTHSQLSQFIKELRKTVFADEMDVVSLGSRKNLCINEEVRKLGNTTRINERCLELQKKKNNEPAKVKNLRACTGVRRTKAMSGCPMLRKHRLQREFRDEVSQSGALDIEDLANLGRNLGTCPYYGSRSMVVKADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMHDSRITLAQLENVHSHLNRYFDRFCNLLGPVNRRYIQTMMVLTRAFLRVLTNEKDANLISSCQHIEKAFQESRQSEFTMSVNDFTFELNVDNVNMIKLVKYIKESKIMHKVSGYGEKVANLEKISVTTKLEHYEDGSTLSAFQALADLLLSLTNNDNDGRIIISRSRTTGPRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVSPQSIMPIAVSRGPSGRSFDFSYSSRSSPDTMQELGLLLCNLVTIVPEGIVVFFSSFDYEAKVYEAWESSGILDRITKKKRIFREPRNNTDIESVLKEYKETVYPSSSINSNGNPASQGGAVLLAVVGGKISEGINLSDGMGRCIVMVGLPYPSPSDIELLERIKHIEGFRNSNPVEASTFSTSYNVYSGDIQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVNKLPQWIKDRLVSSTNNYGEVHRLLHQFFKLNKRVSQ 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0677 964 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 67 957 IPR045028 -
Mibi04g0677 964 MobiDBLite consensus disorder prediction 218 250 - -
Mibi04g0677 964 Pfam DEAD_2 260 448 IPR010614 GO:0003677|GO:0003678|GO:0005524
Mibi04g0677 964 MobiDBLite consensus disorder prediction 120 198 - -
Mibi04g0677 964 Gene3D - 69 126 IPR027417 -
Mibi04g0677 964 Gene3D - 689 929 IPR027417 -
Mibi04g0677 964 CDD SF2_C_XPD 676 914 - -
Mibi04g0677 964 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 62 477 IPR014013 GO:0005524
Mibi04g0677 964 SMART deadxpd 64 476 IPR006554 GO:0003678|GO:0016818
Mibi04g0677 964 Pfam Helicase C-terminal domain 711 927 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mibi04g0677 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 444 IPR027417 -
Mibi04g0677 964 Gene3D - 234 481 IPR027417 -
Mibi04g0677 964 SMART ultradead3 68 476 IPR014001 -
Mibi04g0677 964 SMART Cxpdneu3 729 916 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mibi04g0677 964 TIGRFAM rad3: DNA repair helicase (rad3) 231 945 IPR013020 GO:0003678
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0677 Mibi-ChrMibi04 13292241 13297259 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0677 04 13292241 13297259 Mibi04g0677 04 13292241 13297259 ECH