Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0590 ATGGCTTCTTTGTCTCAACCTTCACATCCGGTGACCAAGCAATATGGTGTGACAAAGCCTTTATCAATGGCTGGGCCAACGGCAGCTGACTTGCAAAGGACTTTGGAGTTAGAGAAGTTTATGGTTGATTCAGGTCTCTATGAGAGCGAAGAGGAGGCTTCTAAGAGAGAGGATGTCCTTCATCGACTTGGACTGATAGTAAAGGATTGGGTGAAGCAACTGACTCGGATAAGAGGATACACTGATCAAATGGTGGAAGATGCTAATGCTGTCATATTCACATTTGGTTCTTATCGACTTGGGGTTCATGGTCCTGGGGCAGACATAGATACATTATGTATAGGACCATCCTATGTGAACCGAGAGGATGACTTTTTCTTTGTATTGCATGACATTCTGGCAATCATGGACGAGGTCTCTGAACTGCAACCGGTTCCGGATGCACATGTACCGGTTATGAAATTCAAATTTGATGGAATATCAATTGATCTACTTTATGCCAGTATATCTTGCTTGGTTGTGCCAGAAAACTTGGACATATCTGATGTTTCTGTCTTATACAATGTGGATGAGCCTACTGTTCGGAGTCTGAATGGATGCCGAGTTGCAGATCAAATTTTAAAGCTTGTTCCAAATGTTGAGCACTTTCGAACAACGCTTCGTTGCTTAAAATTTTGGGCTAAAAGACGAGGTGTTTATTCCAATGTGACTGGATTTCTTGGTGGTGTAAATTGGGCCATTCTTGTTGCTAGAGTGTGCCAGCTCTATCCAAATGCAGTTCCAAGTATGCTTGTCTCACGATTCTTCCGGGTTTATACTCAATGGCGCTGGCCAAATCCTGTTATGTTGTGTCCAATTGAGGAGAATGAGCTTGGATTTTCTGTTTGGGATCCTCGTAAGAATCCTCGTGACCGAACACATCATATGCCCATCATTACTCCCGCCTATCCCTGTATGAATTCTAGTTACAATGTTTCAACAAGTACACTTCGGGTTATGATGGAACAGTTTCATTATGGCAATAATATGTGTGAGGAAATAGATTTGAATAAAGCATGTTGGAGTCTTATGTTTGAGCCATATCTTTTCTTTGAAAGTTATAAAAATTATCTGCAAGTTGACATAGTAGCGGCTGATGCTGATGACTTGCGTACATGGAAGGGTTGGGTGGAATCTCGACTTCGGCAGCTGAATTTGATGATTGAGCGTGACACTTTTGGAAAGTTGCAGTGTCATCCTTATCCTCATGAGTATGTGGATGCTTCTAGACAATGTGCACATTGTGCTTTTTTCATGGGATTGCAGAGGAAGCAAGGGGAGATTGTTCAAGAAGGTCAACAGTTTGATATTCGTGGGACAGTTGATGAATTCCGACATTCTGTTAATATGTACATGTTCTGGAAACCTGGGATGAAAATATATGTTTCTCACGTTCGAAGAAGGCAAATTCCATCTTATGTTTTACCTAATGGTCACTCTAAGAGATCTCGACAGTCAAAGCCAACAGCACAAGGAGAGGAGCCTGCTAAATCATCTCGTGTAGATGATGTGTGTGGGAATGAACATGTTGACAAAAACCTCAAAAGGAAAATTGAGGATATGGTGGGTGAGGGGCACGATGTTGCAAAGAGGCATTCTAGTAATCCTCATAGGCAAGATTCAATTTCTTCGGATCTATTGGATAGATCAGTGGATAGCTTGGGCAGCAGTACAAGAGACAGAACGTGCCTGTTTGAAGTGAATCGATTTCAAGCTTTGGTTTCCAATTCTCCTGATGCCATTTCTGATGGTCAAGAGTTGAGACCTATGGAAAGCATTGAATTGTCATACAGAGGGCAAAATGATTTGGATAAAGGAATGACATCTCCTGAACAAGAAGCTGAATGTGCATCAAATTCTAGCGTCATTACATCTACAAGTGATGGTGGTTCTTCAGAGGATGCTGGGATTGAATCAGTAGCAGGCTGTGCTGATGATAACGTAGGAGTTGAGGGGACTGTCAGAGAGAATGATGGGATAGCCTCTTTGCAGGATGTTGCATGTAAGAGAGGCTCTGTTGCACTTTTGGAGAATGCAGTTACTAGTGAAAAAGGATTAATGCAAGATGAGCTTTGGAGCAATATGAGCAGGAAAGGTTCTTGA 2142 0.4206 MASLSQPSHPVTKQYGVTKPLSMAGPTAADLQRTLELEKFMVDSGLYESEEEASKREDVLHRLGLIVKDWVKQLTRIRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCIGPSYVNREDDFFFVLHDILAIMDEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPENLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFHYGNNMCEEIDLNKACWSLMFEPYLFFESYKNYLQVDIVAADADDLRTWKGWVESRLRQLNLMIERDTFGKLQCHPYPHEYVDASRQCAHCAFFMGLQRKQGEIVQEGQQFDIRGTVDEFRHSVNMYMFWKPGMKIYVSHVRRRQIPSYVLPNGHSKRSRQSKPTAQGEEPAKSSRVDDVCGNEHVDKNLKRKIEDMVGEGHDVAKRHSSNPHRQDSISSDLLDRSVDSLGSSTRDRTCLFEVNRFQALVSNSPDAISDGQELRPMESIELSYRGQNDLDKGMTSPEQEAECASNSSVITSTSDGGSSEDAGIESVAGCADDNVGVEGTVRENDGIASLQDVACKRGSVALLENAVTSEKGLMQDELWSNMSRKGS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0590 713 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 363 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Mibi04g0590 713 MobiDBLite consensus disorder prediction 618 646 - -
Mibi04g0590 713 Pfam Poly(A) polymerase central domain 16 360 IPR007012 GO:0004652|GO:0043631
Mibi04g0590 713 SUPERFAMILY PAP/OAS1 substrate-binding domain 211 360 - -
Mibi04g0590 713 Gene3D Beta Polymerase, domain 2 48 204 IPR043519 -
Mibi04g0590 713 FunFam Putative poly(A) polymerase gamma 190 358 - -
Mibi04g0590 713 SUPERFAMILY Nucleotidyltransferase 12 209 IPR043519 -
Mibi04g0590 713 MobiDBLite consensus disorder prediction 485 522 - -
Mibi04g0590 713 CDD NT_PAP_TUTase 55 210 - -
Mibi04g0590 713 FunFam Nuclear poly(A) polymerase 4 362 478 - -
Mibi04g0590 713 PANTHER POLY A POLYMERASE 11 522 - -
Mibi04g0590 713 MobiDBLite consensus disorder prediction 540 558 - -
Mibi04g0590 713 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Mibi04g0590 713 MobiDBLite consensus disorder prediction 618 650 - -
Mibi04g0590 713 Pfam Poly(A) polymerase predicted RNA binding domain 363 421 IPR007010 GO:0003723|GO:0043631
Mibi04g0590 713 Gene3D - 16 358 - -
Mibi04g0590 713 MobiDBLite consensus disorder prediction 540 559 - -
Mibi04g0590 713 MobiDBLite consensus disorder prediction 489 506 - -
Mibi04g0590 713 FunFam Poly(A) polymerase alpha, putative 48 204 - -
Mibi04g0590 713 Pfam Nucleotidyltransferase domain 86 165 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0590 Mibi-ChrMibi04 11535722 11540579 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0590 04 11535722 11540579 Mibi04g0590 04 11535722 11540579 ECH