Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0584 ATGAGAGTCCTCAGAACTATCTTCACCATCAAGCACCACCTGCTAAATTACCCCACCAATATCAAACACCTTTTTCCATCTCCTTCTCTCGTTTCCTTTCGTTCCTTCCCAAACCCTCGATTTTCTCGTTATTCCCATTCCGTAAGTAGTCACCAGATAGATTTGAGCTTTGGCATTGAAGCCCCAGAAGAACCAAAGACCAGTTTAACAACCCATTCTGAAGGAAGACAAAAATGGTCGCGACAGAGTCACCTATTTAAGGCCTCTAGTAGTGAAGGGCATGATAAAGGTGAAAACTTTAAGGCGAGCTCAGTTCAAAGAAGTGAAAAGGATGTGGGTATTCGAAGGAGAGTTGGGATCAAGAAAAAGGAAAAAGCGAAAACCAATTGGGTTTGTTCGAATTGTGGGTATACGACTAGTCAATGGTTTGGATTTTGCCGATCGTGTAATAGTTCTTCGACCATGAAAGAGTTTCGTGAAGCGAAACTCAGTGGTTCTGGTAACGTTAGTGGCTTTTCAGCTTCAGAAAGTGTGATGGGGTCGTGGCTACCTCAGCAAGCTGGTGAAGTGCTTCCTTTGAAATTGAGGGATGTGAACCGTGGAGTTAATCATCAAGAGTGGAGATTTCCTTTCTCTGGTCTTTTTGGAAATGAAGTTTCAAGAGTTCTTGGAGGTGGTCTTGTACCAGGCTCTTTGATTTTAGTTGGTGGTGATCCTGGTGTTGGGAAGAGTACACTTCTGCTGCAGATTGCCGCAATGATAGCAGAAGGGTGCAACAGTGATGAAGCAGCTCCAGTTGTATATGTATCTGGTGAAGAGAGTATTGAGCAAATTGGTAACAGAGCAGATCGCCTTGGGATTGAATCAGAAATCTATTTATACTCAAGTACCGATATTGAGGACATATTGGAAAAAACTCAGCAACTCTCTGCTCGAGCTGTAGTGGTCGATTCAATACAAACTGTTTATTTGAAAGGAATAGTTGGAAGTGCTGGAGGGATTTCACAGGTGAAGGAATGTACTTCAGCATTGCTGCGATATGCCAAGAAGACTAACACTGCAGTTTTTTTGATTGGGCATGTAACAAAATCTGGAGATATAGCTGGACCTCGTGTCTTGGAGCACATTGTTGATGTTGTTTTATATATGGAAGGTGAGAAGCATTCTTCCCATCGTATGCTTCGAGTGGTGAAAAATCGGTTTGGATCTGCTGATGAGCTCGGAGTCTTTGAGATGTCACAATCAGGTCTCCAAGCTTCTTTAAATGCCAGTGAAATATTTTTAAGTGAGCAACACTTAGATTCAGATGTTTTAGCCGGGTTGGCCATTGCTGTCGTAATGGATGGGTCTCGAGCTTTCCTTATTGAAATTCAGGCACTTTGTGTCTCTGGCTCAACGGTCTCAAGGCATGTTAATGGCATTCAACAAAGTAGGGCTGATATGATCATATCTGTGCTTATGAAGCAAGCTGGACTTCGACTTCAAGAAAATGCTGTGTTTTTAAATGTCGTTAGCGGATTTCAGCTGACTGAGACCGCTGGGGATTTGGCAATAGCGGCTGCAATTTGCAGCAGTTTCTTGGAATTTCCTCTTCCCAAGGGCATAGCATTCATTGGTGAGATTGGCCTGGCTGGTGAACTCCGCACGGTACCTGGATTGGACAAAAGAGTCAACACTGTGGCGAAATTGGGTTACAGAATGTGTGTTGTACCAAAAGAAGCAGAAAAAGTTTTAGGAACATATGGTTTTGAGAAGATGAAAATTGTAGGTTGCAAGAATCTGAAGGAGGTTATTAACACTGTTTTTAAAGAACAAGGGTGA 1821 0.4272 MRVLRTIFTIKHHLLNYPTNIKHLFPSPSLVSFRSFPNPRFSRYSHSVSSHQIDLSFGIEAPEEPKTSLTTHSEGRQKWSRQSHLFKASSSEGHDKGENFKASSVQRSEKDVGIRRRVGIKKKEKAKTNWVCSNCGYTTSQWFGFCRSCNSSSTMKEFREAKLSGSGNVSGFSASESVMGSWLPQQAGEVLPLKLRDVNRGVNHQEWRFPFSGLFGNEVSRVLGGGLVPGSLILVGGDPGVGKSTLLLQIAAMIAEGCNSDEAAPVVYVSGEESIEQIGNRADRLGIESEIYLYSSTDIEDILEKTQQLSARAVVVDSIQTVYLKGIVGSAGGISQVKECTSALLRYAKKTNTAVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRMLRVVKNRFGSADELGVFEMSQSGLQASLNASEIFLSEQHLDSDVLAGLAIAVVMDGSRAFLIEIQALCVSGSTVSRHVNGIQQSRADMIISVLMKQAGLRLQENAVFLNVVSGFQLTETAGDLAIAAAICSSFLEFPLPKGIAFIGEIGLAGELRTVPGLDKRVNTVAKLGYRMCVVPKEAEKVLGTYGFEKMKIVGCKNLKEVINTVFKEQG 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0584 606 Pfam AAA domain 222 365 - -
Mibi04g0584 606 Pfam Subunit ChlI of Mg-chelatase 484 573 - -
Mibi04g0584 606 ProSiteProfiles RecA family profile 1. 208 361 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mibi04g0584 606 TIGRFAM sms: DNA repair protein RadA 125 597 IPR004504 GO:0003684|GO:0005524|GO:0006281
Mibi04g0584 606 SUPERFAMILY Ribosomal protein S5 domain 2-like 398 603 IPR020568 -
Mibi04g0584 606 Gene3D - 218 418 IPR027417 -
Mibi04g0584 606 PRINTS DNA repair protein radA signature 317 341 - -
Mibi04g0584 606 PRINTS DNA repair protein radA signature 221 249 - -
Mibi04g0584 606 PRINTS DNA repair protein radA signature 356 384 - -
Mibi04g0584 606 PRINTS DNA repair protein radA signature 391 417 - -
Mibi04g0584 606 PRINTS DNA repair protein radA signature 132 156 - -
Mibi04g0584 606 PRINTS DNA repair protein radA signature 466 489 - -
Mibi04g0584 606 SMART AAA_5 229 387 IPR003593 -
Mibi04g0584 606 MobiDBLite consensus disorder prediction 88 108 - -
Mibi04g0584 606 Gene3D - 436 606 IPR014721 -
Mibi04g0584 606 FunFam DNA repair protein RadA 206 418 - -
Mibi04g0584 606 FunFam DNA repair protein radA isogeny 436 605 - -
Mibi04g0584 606 MobiDBLite consensus disorder prediction 64 108 - -
Mibi04g0584 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 412 IPR027417 -
Mibi04g0584 606 MobiDBLite consensus disorder prediction 67 81 - -
Mibi04g0584 606 Pfam Rubredoxin metal binding domain 130 157 IPR041166 -
Mibi04g0584 606 PANTHER DNA REPAIR PROTEIN RADA 70 604 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0584 04 11404807 11411538 Mibi04g0584 04 11404807 11411538 ECH