Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0567 ATGGGTTTTTTCAAGTGGGTCTGCTTGATGATTCTCTTGTTATATATCTTCGATGCAACACTCGTTTTATCTGATTCTTCTTTGGGTTCGAATGATCAATTGCCAGTGATTCCCGTTGATTTTTTAGAATCTGCGAAAAGGCCTGTGGTTTTGGATTGGATGATTGCCATTAGAAGGAAGATTCATGAGAACCCTGAACTGGGTTATGAGGAATTTAAGACTAGTGAGCTGATAAGAGAGAAATTGGATGAATTGGGTGTCTCTTATGAATACCCAGTTGCAGTTACTGGTGTTATTGGCTTCATAGGGACAGGACAGCCTCCTTTTGTTGCAATAAGAGCCGATATGGATGCTCTTCCTATGCAGGAAATGGTGGAGTGGGAGCACAAAAGTAAAGTGCCTGGAAAGATGCATGCTTGTGGACATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAGCATGAAAAAGAGATAAAAGGAACTGTTGTGCTTGTTTTCCAACCAGCAGAGGAAGGCGGTGGAGGGGCTAAGAAAGTTTTAGATGCTGGGGCTTTAGAAAACGTCTCTGCTATCTTTGGATTGCATGTCGCTTCTCACTTACCTATTGGTGAAGTGGCCTCTAGGCCTGGTCCCTTTTTGGCAGGAAGTGGCTTCTTCGAAGCAGTAATTAGTGGAAAGGGTGGTCATGCAGCCATTCCTCAACATACAATAGACCCCGTATTGGCTGCTTCTAATGTGATTGTTAGCTTGCAACATCTTGTTTCCCGTGAGGCTGATCCTCTGGACTCCCAGGTCGTGACGGTAGCAAAATTTCAAGGAGGCGGTGCATTCAATGTTATTCCAGATTCAGTCACAATCGGCGGCACCTTCCGAGCTTTTTCAAAGGAAAGTTTCATGCAACTTAGGCAGCGGATTGAGCAGGTTATTACTGGGCAGGCTGCTGTTCAGAGGTGCAATGCAACTGTTAACTTTCTTGATAAAGACAAACCCTTCTTCCCTCCAACTGTTAATGATGGTGACTTGCACAAGCATTTTCTAAAAGTAGCCGGTGATTTGATGGGGAATAGTAAAGTTAAAGAAATGCAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGAGTCTACCTGGTTACTTCTTCATGCTTGGAATGGAAGACACTTCAATTGAACGGCTTGAATCAGCACACTCACCCTATTTCAAAATCAATGAAGATGCACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCTGCTACCTATCTTCTAAGGTTTCAGCAGAATTCGCCGGTTGTAGAAGATAATCATCATGATGAATTATAA 1344 0.4323 MGFFKWVCLMILLLYIFDATLVLSDSSLGSNDQLPVIPVDFLESAKRPVVLDWMIAIRRKIHENPELGYEEFKTSELIREKLDELGVSYEYPVAVTGVIGFIGTGQPPFVAIRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHEKEIKGTVVLVFQPAEEGGGGAKKVLDAGALENVSAIFGLHVASHLPIGEVASRPGPFLAGSGFFEAVISGKGGHAAIPQHTIDPVLAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATVNFLDKDKPFFPPTVNDGDLHKHFLKVAGDLMGNSKVKEMQPLMGSEDFAFYQESLPGYFFMLGMEDTSIERLESAHSPYFKINEDALPYGAALHASLAATYLLRFQQNSPVVEDNHHDEL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0567 447 FunFam N-acetyldiaminopimelate deacetylase 219 337 - -
Mibi04g0567 447 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 338 IPR036264 -
Mibi04g0567 447 Pfam Peptidase dimerisation domain 220 316 IPR011650 -
Mibi04g0567 447 TIGRFAM amidohydrolases: amidohydrolase 54 416 IPR017439 GO:0016787
Mibi04g0567 447 CDD M20_IAA_Hyd 54 429 IPR044757 GO:0009850|GO:0016787
Mibi04g0567 447 Gene3D - 219 337 - -
Mibi04g0567 447 Pfam Peptidase family M20/M25/M40 111 425 IPR002933 GO:0016787
Mibi04g0567 447 SUPERFAMILY Zn-dependent exopeptidases 51 429 - -
Mibi04g0567 447 Gene3D Zn peptidases 54 414 - -
Mibi04g0567 447 PANTHER PEPTIDASE M20 FAMILY MEMBER 37 435 IPR017439 GO:0016787
Mibi04g0567 447 PIRSF Amidohydrol_AmhX 41 432 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0567 Mibi-ChrMibi04 10983112 10986828 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1330 11 32154787 32159604 Mibi04g0567 04 10983112 10986828 CCT