Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0383 ATGACGGTTTCTTCTATAGCTTTATGTGCTAGCCCACCAAGTAGTGTTTGTTCCACTGCTCATCCTTATCATATCAACACACATGCTTCCTACGATCTCGATTTCGGTTCGCGATCATCGCCGCCATCGACGGTGAGGCCAATTTCTTTGTCGAGCTTTATTGGTGGAGAGGAATTGGGATCATTATTTGAATTGAAGGAATTGAGTAGTTCCTTTTCTAGGAGGAGAGATCAGAGCCCAGTTTCTGTTTTCCATGGACCTGTTTCATGTAGTAGTAGCAGTAGTGTTTCTGGTTCTGCTAGGAGTTTGCCAATGAGGATTGGAGGTGATAGCTCATGTAGGGATAGTGGATTGTTCGATGGGTTTGTGAGGAATTCATTGGGTTCTTGCTTGGATTATAATTCTTCAAGTTTAGAGCTGCGTGGTCGTGATGTGGATTATGGTTCTTCATCTTCTATAGCTGATGAGTTGACCTTCAATTTGGAGGATTCTTTTGTTGGGGTTACTTTTGAGCAGTATGCTAGAGAATTGCTTGAGGGTGCCCAGTTGAAGCATAAGATCTTTTGTGAAGAATTCGTTATTAAGGCTTTCTGTGAAGCTGAGAAAGCGCACAGAGGACAGATGCGAGCTTCTGGGGATCCATATTTGCAGCATTGTGTTGAAACAGCGGTTCTGCTTGCTTTGATTGGTGCCAATTCAACAGTTGTGGCTGCTGGGCTTTTGCACGACTCACTTGATGATTCTTTTCTGACTCACGATTACATCTTTGGCCTTTTTGGCGCTGGGGTTGCTGATTTAGTTGAAGGGGTTTCCAAGCTAAGCCACTTGAGCAAGCTTGCACGAGAGAACAATACGGCATGCAAATCAGTTGAGGCAGATCGGCTGCATACCATGTTCCTTGCTATGGTTGATGCAAGAGCCGTTCTCATCAAATTGGCAGATCGATTACATAATATGATGACACTGGAAGCATTGCCTGTGGCCAAGCAGCAAAGATTTGCCAAGGAGACCTTGGAGATTTTTGCACCTTTGGCCAATCGATTGGGAATATCTAGTTGGAAGGAGCAATTGGAGAACTTGTGTTTTAAGCATCTCAATCCTGAACAGCATCAGGAGATTTCTTCAAAGCTTGTGGAATCATGTGATGATGCAATGATTGCCTCTGCTATAGAGAAATTAGAGCAAGCACTTAAAGATGAAGGGATTTCTTACCATGTCCTTTCTGGGCGGCACAAGAGCCCATATAGCATTTATTGCAAAATGCACAAGAAGAAGCTAAGCATGGATGACATTCATGATATTTATGGGCTGCGCTTGATTGTTGACAAGGAGGAGGACTGTTATAAAGCCTTGACAGTCGTTCACCGGTTATGGTCTGAGGTACCTGGAAAGTTCAAGGACTACATTTGTCATCCTAAGTTCAACGGGTATAAATCTCTGCATGCTGTTGTGATGGGTGAAGGAAAGGCTCCCCTTGAAGTACAAATCCGGACAAAAGAGATGCATCTGCAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGGTGATTGCCAGCACTCTTCATTCGTACTTCAGATGGTTGAGTGGGCCCGATGGGTTGTCACCTGGCATTGTGAGACAATGAACAAAGATTGTTCAGCTGTTGGGTGTGCTACTGATTCAGTCAAGCCACCATGCAAGTTCCCTTCCCATGCCGATGATTGTCCGCATTCTTACAAACCTCACTGTGGTCAGGATGGCCCTGTGTTCATCATCTTGATTGAGAATGATAAGATGTCTGTGCAAGAGTTTCCTGCAAACTCAACGGTGATGGACTTGCTGGAGAGAGCTGGGCGAGGAAGCTCTAAGTGGACCCCATACAGGTTTCCGTTGAAAGAAGAGCTGAGGCCGAGGCTGAATTATGAGCCAGTGGCCGATCCAAAGTGTAAGTTGAATATGGGAGATGTGGTGGAGCTTACACCTGCCTTACCTGATAAGTCTCTGACAGAGTATAGGGAAGAAATCCAGCGTATGTACAATAGGGGGCTAACTGTACCTGCTTCAACTGGCATGGTTGGCTCAAGAAGCTGA 2079 0.4502 MTVSSIALCASPPSSVCSTAHPYHINTHASYDLDFGSRSSPPSTVRPISLSSFIGGEELGSLFELKELSSSFSRRRDQSPVSVFHGPVSCSSSSSVSGSARSLPMRIGGDSSCRDSGLFDGFVRNSLGSCLDYNSSSLELRGRDVDYGSSSSIADELTFNLEDSFVGVTFEQYARELLEGAQLKHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCVETAVLLALIGANSTVVAAGLLHDSLDDSFLTHDYIFGLFGAGVADLVEGVSKLSHLSKLARENNTACKSVEADRLHTMFLAMVDARAVLIKLADRLHNMMTLEALPVAKQQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPEQHQEISSKLVESCDDAMIASAIEKLEQALKDEGISYHVLSGRHKSPYSIYCKMHKKKLSMDDIHDIYGLRLIVDKEEDCYKALTVVHRLWSEVPGKFKDYICHPKFNGYKSLHAVVMGEGKAPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVVTWHCETMNKDCSAVGCATDSVKPPCKFPSHADDCPHSYKPHCGQDGPVFIILIENDKMSVQEFPANSTVMDLLERAGRGSSKWTPYRFPLKEELRPRLNYEPVADPKCKLNMGDVVELTPALPDKSLTEYREEIQRMYNRGLTVPASTGMVGSRS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0383 692 Gene3D Hypothetical protein af1432 171 366 - -
Mibi04g0383 692 SMART RelA_SpoT_2 409 519 IPR007685 GO:0015969
Mibi04g0383 692 SUPERFAMILY HD-domain/PDEase-like 178 366 - -
Mibi04g0383 692 ProSiteProfiles HD domain profile. 215 319 IPR006674 -
Mibi04g0383 692 CDD HDc 213 341 IPR003607 -
Mibi04g0383 692 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 103 662 - -
Mibi04g0383 692 Gene3D Beta Polymerase, domain 2 369 499 IPR043519 -
Mibi04g0383 692 SUPERFAMILY Nucleotidyltransferase 356 545 IPR043519 -
Mibi04g0383 692 CDD NT_Rel-Spo_like 389 507 IPR007685 GO:0015969
Mibi04g0383 692 ProSiteProfiles S4 RNA-binding domain profile. 634 670 - -
Mibi04g0383 692 SMART hd_13 211 328 IPR003607 -
Mibi04g0383 692 FunFam GTP pyrophosphokinase RelA 175 366 - -
Mibi04g0383 692 Pfam Region found in RelA / SpoT proteins 409 518 IPR007685 GO:0015969
Mibi04g0383 692 FunFam GTP pyrophosphokinase RelA 367 499 - -
Mibi04g0383 692 Pfam HD domain 200 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0383 Mibi-ChrMibi04 6607257 6610896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0383 208 518 EF-hand Containing Proteins AT3G17470 28.529 1.95e-35 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0383 04 6607257 6610896 Mibi04g0383 04 6607257 6610896 ECH